RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GPSM2P81274 684 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 EYA3Q99504 573 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 MCOLN1Q9GZU1 580 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 VIL1P09327 827 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 TBC1D10BQ4KMP7 808 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 KRT26Q7Z3Y9 468 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 ZIC5Q96T25 663 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
TRAFD1-207ENST00000550051 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 ECE2O60344 883 aa12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 EGFRP00533 1210 aa12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 DLK2Q6UY11 383 aa12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 GBA2Q9HCG7 927 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-207ENST00000550051 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
TRAFD1-207ENST00000550051 DGKZQ13574 1117 aa12.81□□□□□ -0.36
TRAFD1-207ENST00000550051 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
TRAFD1-207ENST00000550051 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
TRAFD1-207ENST00000550051 KIF23Q02241 960 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 MYBBP1AQ9BQG0 1328 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
TRAFD1-207ENST00000550051 ADM5C9JUS6 153 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 ZNF157P51786 506 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 COL4A1P02462 1669 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 ZNF609O15014 1411 aa12.79□□□□□ -0.36
TRAFD1-207ENST00000550051 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 RIC3Q7Z5B4 369 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 GMLQ99445 158 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 MBIPQ9NS73 344 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
TRAFD1-207ENST00000550051 G3V3G9 751 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 PDE8AO60658 829 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 SLC10A3P09131 477 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 FKBP1BP68106 108 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 ANKIB1Q9P2G1 1089 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 GGA1Q9UJY5 639 aa12.77□□□□□ -0.37
TRAFD1-207ENST00000550051 PSME4Q14997 1843 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 TRPA1O75762 1119 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 UFL1O94874 794 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 SCARF1Q14162 830 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 PHAXQ9H814 394 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 GGA3Q9NZ52 723 aa12.76□□□□□ -0.37
TRAFD1-207ENST00000550051 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
TRAFD1-207ENST00000550051 ASTN2O75129 1339 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-207ENST00000550051 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
TRAFD1-207ENST00000550051 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-207ENST00000550051 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
TRAFD1-207ENST00000550051 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
TRAFD1-207ENST00000550051 XDHP47989 1333 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 ATP2B4P23634 1241 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 GNAI1P63096 354 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 ANGEL2Q5VTE6 544 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
TRAFD1-207ENST00000550051 MYD88Q99836 296 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms