RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 USP48Q86UV5 1035 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 ZNF512BQ96KM6 892 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 PANK2Q9BZ23 570 aa10.61□□□□□ -0.71
TMEM116-209ENST00000550020 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 AHDC1Q5TGY3 1603 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 COL22A1Q8NFW1 1626 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-209ENST00000550020 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-209ENST00000550020 HMGN5P82970 282 aaKnown RBP10.6□□□□□ -0.71
TMEM116-209ENST00000550020 UVSSAQ2YD98 709 aa10.6□□□□□ -0.71
TMEM116-209ENST00000550020 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
TMEM116-209ENST00000550020 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-209ENST00000550020 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-209ENST00000550020 ASAP1Q9ULH1 1129 aa10.6□□□□□ -0.71
TMEM116-209ENST00000550020 TPCN1Q9ULQ1 816 aa10.6□□□□□ -0.71
TMEM116-209ENST00000550020 MTMR6Q9Y217 621 aa10.6□□□□□ -0.71
TMEM116-209ENST00000550020 SHANK3Q9BYB0 1731 aa10.6□□□□□ -0.71
TMEM116-209ENST00000550020 ELP1O95163 1332 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 TJP1Q07157 1748 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 PDE8AO60658 829 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 UQCRFS1P1P0C7P4 283 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 CYP19A1P11511 503 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-209ENST00000550020 CPA1P15085 419 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 CTSWP56202 376 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 TIMM10P62072 90 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 ATP2B3Q16720 1220 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 NLRP10Q86W26 655 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 ZSCAN16Q9H4T2 348 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-209ENST00000550020 TMEM63CQ9P1W3 806 aa10.59□□□□□ -0.71
TMEM116-209ENST00000550020 SYCE3A1L190 88 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 GOLGA6L4A6NEF3 574 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 ESPNB1AK53 854 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 DHX16O60231 1041 aaKnown RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 CLCN1P35523 988 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 TOB2Q14106 344 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 IMMTQ16891 758 aaKnown RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 LRRC24Q50LG9 513 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 METTL24Q5JXM2 366 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 LDHAL6AQ6ZMR3 332 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 SMARCC1Q92922 1105 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 CNNM1Q9NRU3 951 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
TMEM116-209ENST00000550020 MROH5Q6ZUA9 1318 aa10.58□□□□□ -0.72
TMEM116-209ENST00000550020 H3BQV1 296 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 IRS4O14654 1257 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-209ENST00000550020 LARGE1O95461 756 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 CYP21A2P08686 494 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 MCM5P33992 734 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 Q6ZUG5 572 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
TMEM116-209ENST00000550020 FBXL16Q8N461 479 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 RGS22Q8NE09 1264 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 APPBP2Q92624 585 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 FAM89AQ96GI7 184 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 ZNF594Q96JF6 807 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-209ENST00000550020 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
TMEM116-209ENST00000550020 CFAP45Q9UL16 551 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 CNPY2Q9Y2B0 182 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 WDR19Q8NEZ3 1342 aa10.57□□□□□ -0.72
TMEM116-209ENST00000550020 RGL2O15211 777 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 FIBPO43427 364 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 PFKFB2O60825 505 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 ITGA6P23229 1130 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 MSNP26038 577 aaKnown RBP10.56□□□□□ -0.72
TMEM116-209ENST00000550020 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
TMEM116-209ENST00000550020 DDB1Q16531 1140 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 WASHC4Q2M389 1173 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 NAA16Q6N069 864 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-209ENST00000550020 NECAB1Q8N987 351 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 TTLL11Q8NHH1 800 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-209ENST00000550020 ZNF274Q96GC6 653 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-209ENST00000550020 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 CCDC39Q9UFE4 941 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 ZNF652Q9Y2D9 606 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 MAST3O60307 1309 aa10.56□□□□□ -0.72
TMEM116-209ENST00000550020 HSPD1P10809 573 aaKnown RBP10.55□□□□□ -0.72
TMEM116-209ENST00000550020 PUM3Q15397 648 aaKnown RBP10.55□□□□□ -0.72
TMEM116-209ENST00000550020 CCDC129Q6ZRS4 1044 aa10.55□□□□□ -0.72
TMEM116-209ENST00000550020 RALYLQ86SE5 291 aaKnown RBP10.55□□□□□ -0.72
TMEM116-209ENST00000550020 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
TMEM116-209ENST00000550020 ZNF34Q8IZ26 560 aa10.55□□□□□ -0.72
TMEM116-209ENST00000550020 BRF1Q92994 677 aa10.55□□□□□ -0.72
TMEM116-209ENST00000550020 LARP6Q9BRS8 491 aaKnown RBP10.55□□□□□ -0.72
TMEM116-209ENST00000550020 AGXT2Q9BYV1 514 aa10.55□□□□□ -0.72
TMEM116-209ENST00000550020 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
TMEM116-209ENST00000550020 CCDC9Q9Y3X0 531 aaKnown RBP10.55□□□□□ -0.72
TMEM116-209ENST00000550020 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms