RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 ECE2O60344 883 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 FKBP1BP68106 108 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 CAP1Q01518 475 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 PRKG1Q13976 671 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 SLC4A8Q2Y0W8 1093 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 DPF3Q92784 378 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
LIN7A-202ENST00000549417 ERVV-1B6SEH8 477 aa9.14□□□□□ -0.95
LIN7A-202ENST00000549417 BBOX1O75936 387 aa9.14□□□□□ -0.95
LIN7A-202ENST00000549417 MYL6BP14649 208 aa9.14□□□□□ -0.95
LIN7A-202ENST00000549417 RPS12P25398 132 aaKnown RBP9.14□□□□□ -0.95
LIN7A-202ENST00000549417 KIF6Q6ZMV9 814 aa9.14□□□□□ -0.95
LIN7A-202ENST00000549417 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
LIN7A-202ENST00000549417 ZNF428Q96B54 188 aa9.14□□□□□ -0.95
LIN7A-202ENST00000549417 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
LIN7A-202ENST00000549417 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
LIN7A-202ENST00000549417 SCN9AQ15858 1988 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 CEMIPQ8WUJ3 1361 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 IBTKQ9P2D0 1353 aaPredicted RBP9.13□□□□□ -0.95
LIN7A-202ENST00000549417 WTIPA6NIX2 430 aaPredicted RBP9.13□□□□□ -0.95
LIN7A-202ENST00000549417 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
LIN7A-202ENST00000549417 DIAPH1O60610 1272 aaKnown RBP9.13□□□□□ -0.95
LIN7A-202ENST00000549417 HCLS1P14317 486 aaPredicted RBP9.13□□□□□ -0.95
LIN7A-202ENST00000549417 PTPN12Q05209 780 aaKnown RBP9.13□□□□□ -0.95
LIN7A-202ENST00000549417 MCM10Q7L590 875 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 ZNF34Q8IZ26 560 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 ZNF333Q96JL9 665 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 CFHR5Q9BXR6 569 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 FZD1Q9UP38 647 aa9.13□□□□□ -0.95
LIN7A-202ENST00000549417 SPTBN5Q9NRC6 3674 aaKnown RBP9.12□□□□□ -0.95
LIN7A-202ENST00000549417 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 TCIRG1Q13488 830 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 SLC9C1Q4G0N8 1177 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 DDX46Q7L014 1031 aaKnown RBP9.12□□□□□ -0.95
LIN7A-202ENST00000549417 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 IFNL1Q8IU54 200 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 ERO1AQ96HE7 468 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 MIS18AQ9NYP9 233 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 POLLQ9UGP5 575 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
LIN7A-202ENST00000549417 EYSQ5T1H1 3165 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 ZNF609O15014 1411 aa9.12□□□□□ -0.95
LIN7A-202ENST00000549417 IGF2BP3O00425 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIN7A-202ENST00000549417 VIL1P09327 827 aaKnown RBP9.11□□□□□ -0.95
LIN7A-202ENST00000549417 GRAPQ13588 217 aa9.11□□□□□ -0.95
LIN7A-202ENST00000549417 DCTN1Q14203 1278 aa9.11□□□□□ -0.95
LIN7A-202ENST00000549417 SPRYD7Q5W111 196 aa9.11□□□□□ -0.95
LIN7A-202ENST00000549417 GRAPLQ8TC17 118 aaPredicted RBP9.11□□□□□ -0.95
LIN7A-202ENST00000549417 PHACTR3Q96KR7 559 aa9.11□□□□□ -0.95
LIN7A-202ENST00000549417 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
LIN7A-202ENST00000549417 PTCH2Q9Y6C5 1203 aa9.11□□□□□ -0.95
LIN7A-202ENST00000549417 LAMB4A4D0S4 1761 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 ANKRD36CQ5JPF3 1778 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 KDM3BQ7LBC6 1761 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 ALDH1A1P00352 501 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 ZNF280AP59817 542 aaPredicted RBP9.1□□□□□ -0.95
LIN7A-202ENST00000549417 GPSM2P81274 684 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 CRHR2Q13324 411 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 SLC10A5Q5PT55 438 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 Q7L0L9 218 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 PRO3102Q9H379 93 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 MYOZ2Q9NPC6 264 aa9.1□□□□□ -0.95
LIN7A-202ENST00000549417 LRRC37AA6NMS7 1700 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 DDX60Q8IY21 1712 aaKnown RBP9.09□□□□□ -0.95
LIN7A-202ENST00000549417 G3V3G9 751 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 NF2P35240 595 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 NBPF9Q3BBW0 867 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 DCAF8Q5TAQ9 597 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.95
LIN7A-202ENST00000549417 NBPF11Q86T75 865 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 KNSTRNQ9Y448 316 aa9.09□□□□□ -0.95
LIN7A-202ENST00000549417 COL4A1P02462 1669 aa9.08□□□□□ -0.96
LIN7A-202ENST00000549417 MANSC4A6NHS7 340 aaPredicted RBP9.08□□□□□ -0.96
LIN7A-202ENST00000549417 SP3Q02447 781 aa9.08□□□□□ -0.96
LIN7A-202ENST00000549417 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
LIN7A-202ENST00000549417 PARP10Q53GL7 1025 aa9.08□□□□□ -0.96
LIN7A-202ENST00000549417 ARMC9Q7Z3E5 817 aa9.08□□□□□ -0.96
LIN7A-202ENST00000549417 CELF1Q92879 486 aaKnown RBP9.08□□□□□ -0.96
LIN7A-202ENST00000549417 THUMPD2Q9BTF0 503 aaKnown RBP9.08□□□□□ -0.96
LIN7A-202ENST00000549417 ANGEL1Q9UNK9 670 aaKnown RBP9.08□□□□□ -0.96
LIN7A-202ENST00000549417 ECM2O94769 699 aaPredicted RBP9.07□□□□□ -0.96
LIN7A-202ENST00000549417 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 PRKAR2BP31323 418 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
LIN7A-202ENST00000549417 DEFB123Q8N688 67 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 TBC1D16Q8TBP0 767 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
LIN7A-202ENST00000549417 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 CLMNQ96JQ2 1002 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 EYA3Q99504 573 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 PRUNE2Q8WUY3 3088 aa9.07□□□□□ -0.96
LIN7A-202ENST00000549417 LAMA2P24043 3122 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms