RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CDCA5Q96FF9 252 aa14.24□□□□□ -0.13
TRAFD1-206ENST00000549358 POLLQ9UGP5 575 aa14.24□□□□□ -0.13
TRAFD1-206ENST00000549358 HDAC9Q9UKV0 1011 aa14.24□□□□□ -0.13
TRAFD1-206ENST00000549358 DUOX1Q9NRD9 1551 aa14.23□□□□□ -0.13
TRAFD1-206ENST00000549358 ECE2O60344 883 aa14.23□□□□□ -0.13
TRAFD1-206ENST00000549358 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
TRAFD1-206ENST00000549358 PKN2Q16513 984 aaKnown RBP14.23□□□□□ -0.13
TRAFD1-206ENST00000549358 GGA3Q9NZ52 723 aa14.23□□□□□ -0.13
TRAFD1-206ENST00000549358 TSPYL4Q9UJ04 414 aa14.23□□□□□ -0.13
TRAFD1-206ENST00000549358 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 GPSM2P81274 684 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 NFE2L2Q16236 605 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 RASAL3Q86YV0 1011 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 CELF1Q92879 486 aaKnown RBP14.22□□□□□ -0.13
TRAFD1-206ENST00000549358 ANGEL2Q5VTE6 544 aaKnown RBP14.21□□□□□ -0.13
TRAFD1-206ENST00000549358 ZNF296Q8WUU4 475 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-206ENST00000549358 PLEKHF1Q96S99 279 aa14.21□□□□□ -0.13
TRAFD1-206ENST00000549358 EYA3Q99504 573 aa14.21□□□□□ -0.13
TRAFD1-206ENST00000549358 LAMB2P55268 1798 aa14.2□□□□□ -0.14
TRAFD1-206ENST00000549358 ANKRD36CQ5JPF3 1778 aa14.2□□□□□ -0.14
TRAFD1-206ENST00000549358 SCARF1Q14162 830 aa14.2□□□□□ -0.14
TRAFD1-206ENST00000549358 TBC1D16Q8TBP0 767 aa14.2□□□□□ -0.14
TRAFD1-206ENST00000549358 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
TRAFD1-206ENST00000549358 G3V3G9 751 aa14.19□□□□□ -0.14
TRAFD1-206ENST00000549358 VIL1P09327 827 aaKnown RBP14.19□□□□□ -0.14
TRAFD1-206ENST00000549358 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
TRAFD1-206ENST00000549358 MOB2Q70IA6 237 aa14.19□□□□□ -0.14
TRAFD1-206ENST00000549358 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
TRAFD1-206ENST00000549358 SCAF8Q9UPN6 1271 aaKnown RBP14.19□□□□□ -0.14
TRAFD1-206ENST00000549358 TAF1P21675 1872 aa14.18□□□□□ -0.14
TRAFD1-206ENST00000549358 FKBP1BP68106 108 aa14.18□□□□□ -0.14
TRAFD1-206ENST00000549358 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
TRAFD1-206ENST00000549358 GCC1Q96CN9 775 aa14.18□□□□□ -0.14
TRAFD1-206ENST00000549358 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 AKAP11Q9UKA4 1901 aa14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 UBE2Q2LH0YL09 131 aa14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 GPR25O00155 361 aa14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 ZNF280AP59817 542 aaPredicted RBP14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 RTL5Q5HYW3 569 aaPredicted RBP14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 LRRC37AA6NMS7 1700 aa14.17□□□□□ -0.14
TRAFD1-206ENST00000549358 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 DLG5Q8TDM6 1919 aa14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 TM4SF4P48230 202 aa14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 RPS8P62241 208 aaKnown RBP14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 PRAMEF18Q5VWM3 479 aa14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 RSBN1LQ6PCB5 846 aaPredicted RBP14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 FBXO46Q6PJ61 603 aaPredicted RBP14.16□□□□□ -0.14
TRAFD1-206ENST00000549358 POLR2AP24928 1970 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 USP17L8P0C7I0 530 aa14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 TTLL12Q14166 644 aaPredicted RBP14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 HABP4Q5JVS0 413 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 AGBL3Q8NEM8 1001 aa14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 MYOZ2Q9NPC6 264 aa14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 ANKIB1Q9P2G1 1089 aa14.15□□□□□ -0.14
TRAFD1-206ENST00000549358 COL4A1P02462 1669 aa14.14□□□□□ -0.15
TRAFD1-206ENST00000549358 UFL1O94874 794 aa14.14□□□□□ -0.15
TRAFD1-206ENST00000549358 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
TRAFD1-206ENST00000549358 RIPK4P57078 832 aa14.14□□□□□ -0.15
TRAFD1-206ENST00000549358 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
TRAFD1-206ENST00000549358 PLBD2Q8NHP8 589 aa14.14□□□□□ -0.15
TRAFD1-206ENST00000549358 IRS4O14654 1257 aaPredicted RBP14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 ISCA1Q9BUE6 129 aa14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 BABAM1Q9NWV8 329 aa14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 PODXL2Q9NZ53 605 aa14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 CHPF2Q9P2E5 772 aa14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 PITPNM2Q9BZ72 1349 aa14.13□□□□□ -0.15
TRAFD1-206ENST00000549358 FKTNO75072 461 aa14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 NOM1Q5C9Z4 860 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 GMLQ99445 158 aa14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 R3HDMLQ9H3Y0 253 aa14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 SEC31BQ9NQW1 1179 aa14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-206ENST00000549358 PAPPA2Q9BXP8 1791 aa14.11□□□□□ -0.15
TRAFD1-206ENST00000549358 SREBF2Q12772 1141 aa14.11□□□□□ -0.15
TRAFD1-206ENST00000549358 NBPF9Q3BBW0 867 aa14.11□□□□□ -0.15
TRAFD1-206ENST00000549358 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
TRAFD1-206ENST00000549358 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
TRAFD1-206ENST00000549358 PRKG1Q13976 671 aa14.1□□□□□ -0.15
TRAFD1-206ENST00000549358 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
TRAFD1-206ENST00000549358 SCN9AQ15858 1988 aa14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 NF2P35240 595 aa14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 HDGFL1Q5TGJ6 251 aa14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 CFHR5Q9BXR6 569 aa14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
TRAFD1-206ENST00000549358 ZNF609O15014 1411 aa14.08□□□□□ -0.15
TRAFD1-206ENST00000549358 TRIM28Q13263 835 aaKnown RBP14.08□□□□□ -0.16
TRAFD1-206ENST00000549358 PODNQ7Z5L7 613 aa14.08□□□□□ -0.16
TRAFD1-206ENST00000549358 CCDC85AQ96PX6 553 aaPredicted RBP14.08□□□□□ -0.16
TRAFD1-206ENST00000549358 MXD3Q9BW11 206 aa14.08□□□□□ -0.16
TRAFD1-206ENST00000549358 DBF4Q9UBU7 674 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms