RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 EIF4A2Q14240 407 aaKnown RBP8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 NBPF20Q3BBV1 942 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 Q6ZNB5 142 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 SEPT12Q8IYM1 358 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
TGFBR1-206ENST00000549021 RNF123Q5XPI4 1314 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 HSP90AB2PQ58FF8 381 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 INTS6LQ5JSJ4 861 aaKnown RBP8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 BRINP3Q76B58 766 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 RNF135Q8IUD6 432 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 WDR63Q8IWG1 891 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 SLAIN2Q9P270 581 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 FAM208AQ9UK61 1670 aaKnown RBP8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 CAMTA1Q9Y6Y1 1673 aa8.59□□□□□ -1.03
TGFBR1-206ENST00000549021 MAPK8IP3Q9UPT6 1336 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 TNS3Q68CZ2 1445 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 CARNS1A5YM72 827 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 TIMP2P16035 220 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 FSHRP23945 695 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 HOXC9P31274 260 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 AMPHP49418 695 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 XPCQ01831 940 aaPredicted RBP8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 PHTF2Q8N3S3 785 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
TGFBR1-206ENST00000549021 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 E9PSI1 815 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 GCP02774 474 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 NEFLP07196 543 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 NEFMP07197 916 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 HMOX1P09601 288 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 PRKAR2BP31323 418 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 ELOAQ14241 798 aaKnown RBP8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 CCDC116Q8IYX3 515 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 DEPDC4Q8N2C3 294 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 IP6K1Q92551 441 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 RRP7AQ9Y3A4 280 aaKnown RBP8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 ABCC6O95255 1503 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 KDRP35968 1356 aa8.57□□□□□ -1.04
TGFBR1-206ENST00000549021 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 SPATA31A3Q5VYP0 1347 aa8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 LZTS3O60299 673 aaPredicted RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 GIGYF1O75420 1035 aaPredicted RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 RIPK4P57078 832 aa8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 DHX9Q08211 1270 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 LARP1Q6PKG0 1096 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 ARHGEF25Q86VW2 580 aa8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 DDX17Q92841 729 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 PHACTR3Q96KR7 559 aa8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-206ENST00000549021 IL16Q14005 1332 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 ATP5J2-PTCD1G3V325 749 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 AXIN1O15169 862 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 NCOA4Q13772 614 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 PPP1R26Q5T8A7 1209 aaPredicted RBP8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 PLPP7Q8NBV4 271 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 RCAN3Q9UKA8 241 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 LMO7Q8WWI1 1683 aa8.55□□□□□ -1.04
TGFBR1-206ENST00000549021 AHDC1Q5TGY3 1603 aaPredicted RBP8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 EML3Q32P44 896 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 MAP7D1Q3KQU3 841 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 Q6ZVU0 165 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 ITPKCQ96DU7 683 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
TGFBR1-206ENST00000549021 CACNA1FO60840 1977 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L12C9JPN9 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L21D6R901 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 ERVH48-1M5A8F1 160 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 CAPN5O15484 640 aaPredicted RBP8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 RASA1P20936 1047 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 WDR4P57081 412 aaKnown RBP8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms