RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
CACNB3-209ENST00000548860 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-209ENST00000548860 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-209ENST00000548860 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-209ENST00000548860 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
CACNB3-209ENST00000548860 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
CACNB3-209ENST00000548860 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
CACNB3-209ENST00000548860 IGKV5-2P06315 115 aa16.58■□□□□ 0.25
CACNB3-209ENST00000548860 VPS37DQ86XT2 251 aa16.58■□□□□ 0.25
CACNB3-209ENST00000548860 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
CACNB3-209ENST00000548860 IMMTQ16891 758 aaKnown RBP16.58■□□□□ 0.24
CACNB3-209ENST00000548860 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
CACNB3-209ENST00000548860 TMC6Q7Z403 805 aa16.58■□□□□ 0.24
CACNB3-209ENST00000548860 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.24
CACNB3-209ENST00000548860 KIF24Q5T7B8 1368 aa16.58■□□□□ 0.24
CACNB3-209ENST00000548860 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 RIOK3O14730 519 aaKnown RBP16.57■□□□□ 0.24
CACNB3-209ENST00000548860 AKAP17AQ02040 695 aaKnown RBP16.57■□□□□ 0.24
CACNB3-209ENST00000548860 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 CEP57L1Q8IYX8 460 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 SNAP23O00161 211 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 ZNF213O14771 459 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
CACNB3-209ENST00000548860 CFAP100Q494V2 611 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 PREX1Q8TCU6 1659 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 RGS12O14924 1447 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 CYP21A2P08686 494 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 CPLX3Q8WVH0 158 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 TRMT112Q9UI30 125 aaKnown RBP16.57■□□□□ 0.24
CACNB3-209ENST00000548860 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
CACNB3-209ENST00000548860 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-209ENST00000548860 ERICH4A6NGS2 130 aa16.56■□□□□ 0.24
CACNB3-209ENST00000548860 RAD21O60216 631 aa16.56■□□□□ 0.24
CACNB3-209ENST00000548860 NAA30Q147X3 362 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-209ENST00000548860 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
CACNB3-209ENST00000548860 ZSWIM4Q9H7M6 989 aa16.56■□□□□ 0.24
CACNB3-209ENST00000548860 U2AF2P26368 475 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNB3-209ENST00000548860 POLA2Q14181 598 aa16.56■□□□□ 0.24
CACNB3-209ENST00000548860 TRERF1Q96PN7 1200 aa16.56■□□□□ 0.24
CACNB3-209ENST00000548860 CLTCQ00610 1675 aaKnown RBP16.55■□□□□ 0.24
CACNB3-209ENST00000548860 SKILP12757 684 aa16.55■□□□□ 0.24
CACNB3-209ENST00000548860 DDX19AQ9NUU7 478 aaKnown RBP16.55■□□□□ 0.24
CACNB3-209ENST00000548860 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
CACNB3-209ENST00000548860 TDO2P48775 406 aa16.55■□□□□ 0.24
CACNB3-209ENST00000548860 PHKBQ93100 1093 aa16.55■□□□□ 0.24
CACNB3-209ENST00000548860 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
CACNB3-209ENST00000548860 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
CACNB3-209ENST00000548860 NUTM2BA6NNL0 878 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NUTM2EB1AL46 878 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-209ENST00000548860 TAF5LO75529 589 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 PTPN14Q15678 1187 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 SLC9C2Q5TAH2 1124 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NUTM2AQ8IVF1 878 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-209ENST00000548860 AIDAQ96BJ3 306 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
CACNB3-209ENST00000548860 PRC1O43663 620 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 ADORA1P30542 326 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NPHP3Q7Z494 1330 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NECTIN1Q15223 517 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
CACNB3-209ENST00000548860 NEURL4Q96JN8 1562 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 DYNC1I1O14576 645 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 MIGA1Q8NAN2 632 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 SCRN1Q12765 414 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
CACNB3-209ENST00000548860 TTC14Q96N46 770 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 ACSBG1Q96GR2 724 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 ADCY9O60503 1353 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 RICTORQ6R327 1708 aa16.53■□□□□ 0.24
CACNB3-209ENST00000548860 LRRFIP1Q32MZ4 808 aaKnown RBP16.52■□□□□ 0.24
CACNB3-209ENST00000548860 ADAMTS2O95450 1211 aa16.52■□□□□ 0.24
CACNB3-209ENST00000548860 MNS1Q8NEH6 495 aa16.52■□□□□ 0.24
CACNB3-209ENST00000548860 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.24
CACNB3-209ENST00000548860 SLC3A2P08195 630 aaKnown RBP16.52■□□□□ 0.23
CACNB3-209ENST00000548860 MCM5P33992 734 aa16.52■□□□□ 0.23
CACNB3-209ENST00000548860 ARHGEF25Q86VW2 580 aa16.52■□□□□ 0.23
CACNB3-209ENST00000548860 AIFM3Q96NN9 605 aa16.52■□□□□ 0.23
CACNB3-209ENST00000548860 ERICH2A1L162 156 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 ZAP70P43403 619 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
CACNB3-209ENST00000548860 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
CACNB3-209ENST00000548860 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
CACNB3-209ENST00000548860 ZNF500O60304 480 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-209ENST00000548860 GOLGA8FQ08AF8 430 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 GOLGA8DPQ0D2H9 430 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 HMG20BQ9P0W2 317 aa16.51■□□□□ 0.23
CACNB3-209ENST00000548860 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-209ENST00000548860 CCDC69A6NI79 296 aa16.5■□□□□ 0.23
CACNB3-209ENST00000548860 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms