RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 G2E3Q7L622 706 aa22.36■■□□□ 1.17
CHMP1A-205ENST00000548650 MICALL2Q8IY33 904 aa22.36■■□□□ 1.17
CHMP1A-205ENST00000548650 CCDC85AQ96PX6 553 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-205ENST00000548650 PGAP2Q9UHJ9 254 aa22.36■■□□□ 1.17
CHMP1A-205ENST00000548650 ZBTB12Q9Y330 459 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-205ENST00000548650 ZNF646O15015 1829 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-205ENST00000548650 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
CHMP1A-205ENST00000548650 CTSWP56202 376 aa22.35■■□□□ 1.17
CHMP1A-205ENST00000548650 GLIS2Q9BZE0 524 aaPredicted RBP22.35■■□□□ 1.17
CHMP1A-205ENST00000548650 CNOT7Q9UIV1 285 aaKnown RBP22.35■■□□□ 1.17
CHMP1A-205ENST00000548650 WDR33Q9C0J8 1336 aaKnown RBP22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 ANP32CO43423 234 aa22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 UFL1O94874 794 aa22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 DOK7Q18PE1 504 aa22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 CWF19L2Q2TBE0 894 aaKnown RBP22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 DPF2Q92785 391 aa22.34■■□□□ 1.17
CHMP1A-205ENST00000548650 ZNF609O15014 1411 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 NEURL1BA8MQ27 555 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 NEXNQ0ZGT2 675 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 KCNQ5Q9NR82 932 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 WBP1LQ9NX94 342 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 ANKIB1Q9P2G1 1089 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 TLL2Q9Y6L7 1015 aa22.33■■□□□ 1.17
CHMP1A-205ENST00000548650 SLC4A2P04920 1241 aa22.32■■□□□ 1.16
CHMP1A-205ENST00000548650 RPS12P25398 132 aaKnown RBP22.32■■□□□ 1.16
CHMP1A-205ENST00000548650 GGA1Q9UJY5 639 aa22.32■■□□□ 1.16
CHMP1A-205ENST00000548650 POLR2AP24928 1970 aaKnown RBP22.32■■□□□ 1.16
CHMP1A-205ENST00000548650 XDHP47989 1333 aa22.31■■□□□ 1.16
CHMP1A-205ENST00000548650 H7C1D1 291 aa22.31■■□□□ 1.16
CHMP1A-205ENST00000548650 FLIIQ13045 1269 aa22.31■■□□□ 1.16
CHMP1A-205ENST00000548650 ANKRD18AQ8IVF6 992 aa22.31■■□□□ 1.16
CHMP1A-205ENST00000548650 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
CHMP1A-205ENST00000548650 ZC3H12CQ9C0D7 883 aaKnown RBP22.31■■□□□ 1.16
CHMP1A-205ENST00000548650 A0A1B0GUL6 1792 aa22.3■■□□□ 1.16
CHMP1A-205ENST00000548650 CELF2O95319 508 aaKnown RBP22.3■■□□□ 1.16
CHMP1A-205ENST00000548650 EGFRP00533 1210 aa22.3■■□□□ 1.16
CHMP1A-205ENST00000548650 SAMD7Q7Z3H4 446 aa22.3■■□□□ 1.16
CHMP1A-205ENST00000548650 TTLL11Q8NHH1 800 aa22.3■■□□□ 1.16
CHMP1A-205ENST00000548650 CAPNS2Q96L46 248 aa22.3■■□□□ 1.16
CHMP1A-205ENST00000548650 CTCFP49711 727 aaPredicted RBP22.29■■□□□ 1.16
CHMP1A-205ENST00000548650 CYP4F22Q6NT55 531 aa22.29■■□□□ 1.16
CHMP1A-205ENST00000548650 UBE3BQ7Z3V4 1068 aa22.29■■□□□ 1.16
CHMP1A-205ENST00000548650 WDR63Q8IWG1 891 aa22.29■■□□□ 1.16
CHMP1A-205ENST00000548650 CDC5LQ99459 802 aaKnown RBP22.29■■□□□ 1.16
CHMP1A-205ENST00000548650 GREM2Q9H772 168 aa22.29■■□□□ 1.16
CHMP1A-205ENST00000548650 H7C1W4 665 aa22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 TBC1D10BQ4KMP7 808 aaPredicted RBP22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 PAXIP1Q6ZW49 1069 aaPredicted RBP22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 SAPCD2Q86UD0 394 aa22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 PRDM10Q9NQV6 1147 aa22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
CHMP1A-205ENST00000548650 VIL1P09327 827 aaKnown RBP22.27■■□□□ 1.16
CHMP1A-205ENST00000548650 ECE1P42892 770 aa22.27■■□□□ 1.16
CHMP1A-205ENST00000548650 GCKRQ14397 625 aa22.27■■□□□ 1.16
CHMP1A-205ENST00000548650 MED23Q9ULK4 1368 aa22.26■■□□□ 1.15
CHMP1A-205ENST00000548650 VAMP4O75379 141 aa22.26■■□□□ 1.15
CHMP1A-205ENST00000548650 MAP2K1Q02750 393 aaPredicted RBP22.26■■□□□ 1.15
CHMP1A-205ENST00000548650 EXOSC9Q06265 439 aaKnown RBP22.26■■□□□ 1.15
CHMP1A-205ENST00000548650 FKBP5Q13451 457 aaPredicted RBP22.26■■□□□ 1.15
CHMP1A-205ENST00000548650 HSPA8P11142 646 aaKnown RBP22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 ATP2B4P23634 1241 aa22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 CASP7P55210 303 aa22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 GRM1Q13255 1194 aa22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 PLA2G12BQ9BX93 195 aa22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 ZNF408Q9H9D4 720 aa22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 SPINK5Q9NQ38 1064 aaPredicted RBP22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 BSDC1Q9NW68 430 aaPredicted RBP22.25■■□□□ 1.15
CHMP1A-205ENST00000548650 WTIPA6NIX2 430 aaPredicted RBP22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 CAPN15O75808 1086 aa22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 KIF4BQ2VIQ3 1234 aa22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 DLK2Q6UY11 383 aa22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 LINS1Q8NG48 757 aa22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 HHIPL1Q96JK4 782 aa22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 MINPP1Q9UNW1 487 aa22.24■■□□□ 1.15
CHMP1A-205ENST00000548650 G3V3G9 751 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 LBX1P52954 281 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 FAM161AQ3B820 660 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 DCAF8Q5TAQ9 597 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 RSBN1LQ6PCB5 846 aaPredicted RBP22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 KRT26Q7Z3Y9 468 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 USP48Q86UV5 1035 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 MYH16Q9H6N6 1097 aa22.23■■□□□ 1.15
CHMP1A-205ENST00000548650 AOC2O75106 756 aa22.22■■□□□ 1.15
CHMP1A-205ENST00000548650 RBM26Q5T8P6 1007 aaKnown RBP22.22■■□□□ 1.15
CHMP1A-205ENST00000548650 ADM5C9JUS6 153 aa22.21■■□□□ 1.15
CHMP1A-205ENST00000548650 ZNF280AP59817 542 aaPredicted RBP22.21■■□□□ 1.15
CHMP1A-205ENST00000548650 AGBL3Q8NEM8 1001 aa22.21■■□□□ 1.15
CHMP1A-205ENST00000548650 GMLQ99445 158 aa22.21■■□□□ 1.15
CHMP1A-205ENST00000548650 GGA3Q9NZ52 723 aa22.21■■□□□ 1.15
CHMP1A-205ENST00000548650 ASTN2O75129 1339 aaPredicted RBP22.21■■□□□ 1.15
CHMP1A-205ENST00000548650 ITGA6P23229 1130 aa22.2■■□□□ 1.14
CHMP1A-205ENST00000548650 CCT4P50991 539 aaKnown RBP22.2■■□□□ 1.14
CHMP1A-205ENST00000548650 PODNQ7Z5L7 613 aa22.2■■□□□ 1.14
CHMP1A-205ENST00000548650 CSF1RP07333 972 aa22.19■■□□□ 1.14
CHMP1A-205ENST00000548650 MAP2K2P36507 400 aa22.19■■□□□ 1.14
CHMP1A-205ENST00000548650 IGHMBP2P38935 993 aaKnown RBP22.19■■□□□ 1.14
CHMP1A-205ENST00000548650 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 628.4 ms