RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
TMEM106C-209ENST00000548640 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
TMEM106C-209ENST00000548640 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
TMEM106C-209ENST00000548640 RPAP1Q9BWH6 1393 aaPredicted RBP16.75■□□□□ 0.27
TMEM106C-209ENST00000548640 NUP98P52948 1817 aa16.75■□□□□ 0.27
TMEM106C-209ENST00000548640 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 TIMM10P62072 90 aa16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 DDX46Q7L014 1031 aaKnown RBP16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
TMEM106C-209ENST00000548640 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
TMEM106C-209ENST00000548640 MYH3P11055 1940 aa16.73■□□□□ 0.27
TMEM106C-209ENST00000548640 ZSCAN25Q6NSZ9 544 aa16.73■□□□□ 0.27
TMEM106C-209ENST00000548640 EDC3Q96F86 508 aaKnown RBP16.73■□□□□ 0.27
TMEM106C-209ENST00000548640 C8orf37Q96NL8 207 aa16.73■□□□□ 0.27
TMEM106C-209ENST00000548640 SMC3Q9UQE7 1217 aa16.73■□□□□ 0.27
TMEM106C-209ENST00000548640 MROH5Q6ZUA9 1318 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 RIC1Q4ADV7 1423 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 RNF113AO15541 343 aaKnown RBP16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 BRD1O95696 1058 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 ZMYM1Q5SVZ6 1142 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 DSCC1Q9BVC3 393 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 GREM2Q9H772 168 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 RIPOR2Q9Y4F9 1068 aa16.72■□□□□ 0.27
TMEM106C-209ENST00000548640 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 CAMTA2O94983 1202 aa16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 UQCRFS1P1P0C7P4 283 aa16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 MCTP1Q6DN14 999 aa16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 FNBP4Q8N3X1 1017 aaPredicted RBP16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 RTL9Q8NET4 1388 aa16.71■□□□□ 0.27
TMEM106C-209ENST00000548640 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 LRP5O75197 1615 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 RPS6KB1P23443 525 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 ITPK1Q13572 414 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 KLHL40Q2TBA0 621 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 CCDC152Q4G0S7 254 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
TMEM106C-209ENST00000548640 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
TMEM106C-209ENST00000548640 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
TMEM106C-209ENST00000548640 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
TMEM106C-209ENST00000548640 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
TMEM106C-209ENST00000548640 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
TMEM106C-209ENST00000548640 SLC5A1P13866 664 aa16.68■□□□□ 0.26
TMEM106C-209ENST00000548640 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
TMEM106C-209ENST00000548640 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
TMEM106C-209ENST00000548640 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM106C-209ENST00000548640 LAMB2P55268 1798 aa16.68■□□□□ 0.26
TMEM106C-209ENST00000548640 PDE8BO95263 885 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 MBD3O95983 291 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 NCLP19338 710 aaKnown RBP16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 PDCP20941 246 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 ADORA1P30542 326 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 SUSD4Q5VX71 490 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 LPIN2Q92539 896 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 USP21Q9UK80 565 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
TMEM106C-209ENST00000548640 BCORQ6W2J9 1755 aa16.66■□□□□ 0.26
TMEM106C-209ENST00000548640 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
TMEM106C-209ENST00000548640 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
TMEM106C-209ENST00000548640 APPBP2Q92624 585 aa16.66■□□□□ 0.26
TMEM106C-209ENST00000548640 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
TMEM106C-209ENST00000548640 NTSR2O95665 410 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 CPA1P15085 419 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 PKP1Q13835 747 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 CCDC129Q6ZRS4 1044 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 CDC5LQ99459 802 aaKnown RBP16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 LMBRD1Q9NUN5 540 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 MAST3O60307 1309 aa16.65■□□□□ 0.26
TMEM106C-209ENST00000548640 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 STX6O43752 255 aa16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 MRE11P49959 708 aa16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 SEC62Q99442 399 aaKnown RBP16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 NHSQ6T4R5 1651 aa16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 ARAP2Q8WZ64 1704 aa16.64■□□□□ 0.25
TMEM106C-209ENST00000548640 KCNQ2O43526 872 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms