RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 FOXD4L3Q6VB84 417 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 DDX17Q92841 729 aaKnown RBP8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 PGBD1Q96JS3 809 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 KCNF1Q9H3M0 494 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 MRVI1Q9Y6F6 885 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 PFKFB2O60825 505 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 CIAO1O76071 339 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 GIMAP6Q6P9H5 292 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 PIBF1Q8WXW3 757 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 RIC1Q4ADV7 1423 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 ADCY5O95622 1261 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 RNF20Q5VTR2 975 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 LEO1Q8WVC0 666 aaPredicted RBP8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 SEC62Q99442 399 aaKnown RBP8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 ISCA1Q9BUE6 129 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 DSCC1Q9BVC3 393 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 HELLSQ9NRZ9 838 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 ATG3Q9NT62 314 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 PDCP20941 246 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 MCMDC2Q4G0Z9 681 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 LARP1BQ659C4 914 aaKnown RBP8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 CCDC129Q6ZRS4 1044 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 JARID2Q92833 1246 aaPredicted RBP8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 LLPHQ9BRT6 129 aaKnown RBP8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 USP25Q9UHP3 1055 aa8.49□□□□□ -1.05
PDZRN4-204ENST00000548316 SLIT2O94813 1529 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 WDR17Q8IZU2 1322 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 JAK2O60674 1132 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 GTF2F1P35269 517 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 TTLL7Q6ZT98 887 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 CLSTN2Q9H4D0 955 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 ATRNO75882 1429 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 PIP4K2AP48426 406 aaPredicted RBP8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 KRT85P78386 507 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 SASS6Q6UVJ0 657 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 NSUN7Q8NE18 718 aaKnown RBP8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 TCEANC2Q96MN5 208 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 NEK1Q96PY6 1258 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 PLA2G12BQ9BX93 195 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 ABCC12Q96J65 1359 aa8.48□□□□□ -1.05
PDZRN4-204ENST00000548316 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 DISP2A7MBM2 1401 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 A0A087WZG4 1122 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 SCRN1Q12765 414 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 FAM173BQ6P4H8 233 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 ILDR1Q86SU0 546 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 A0A0G2JLW4 131 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 LMBR1LQ6UX01 489 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 Q6ZUG5 572 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 TDRD7Q8NHU6 1098 aaKnown RBP8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 NDUFB9Q9Y6M9 179 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
PDZRN4-204ENST00000548316 ATP5J2-PTCD1G3V325 749 aa8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 TRIM28Q13263 835 aaKnown RBP8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 CHRNA2Q15822 529 aa8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 SCAND2PQ9GZW5 306 aaPredicted RBP8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 RCOR1Q9UKL0 485 aa8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 MAST3O60307 1309 aa8.46□□□□□ -1.05
PDZRN4-204ENST00000548316 VPS37CA5D8V6 355 aaPredicted RBP8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 CABP4P57796 275 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 TYRO3Q06418 890 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 KIAA2012Q0VF49 1180 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 CCDC191Q8NCU4 936 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 RGS22Q8NE09 1264 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 KIAA1524Q8TCG1 905 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 FAM200AQ8TCP9 573 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 BRF1Q92994 677 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 DDX19AQ9NUU7 478 aaKnown RBP8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 DLEC1Q9Y238 1755 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 NEDD4P46934 1319 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 EYA2O00167 538 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 DYNC1I1O14576 645 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 IL15P40933 162 aaPredicted RBP8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 SLFNL1Q499Z3 407 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 PAG1Q9NWQ8 432 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 CWC25Q9NXE8 425 aaPredicted RBP8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 FBXO3Q9UK99 471 aa8.46□□□□□ -1.06
PDZRN4-204ENST00000548316 ROBO1Q9Y6N7 1651 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 M0R2C6 588 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 CSF1RP07333 972 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 MAP3K11Q16584 847 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 LRRC24Q50LG9 513 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 DHX32Q7L7V1 743 aaKnown RBP8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 TTC5Q8N0Z6 440 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 ENGASEQ8NFI3 743 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 MYRIPQ8NFW9 859 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 COL14A1Q05707 1796 aaKnown RBP8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 CCDC192P0DO97 292 aa8.45□□□□□ -1.06
PDZRN4-204ENST00000548316 ATF3P18847 181 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms