RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 BMP3P12645 472 aa5.31□□□□□ -1.56
CEP290-204ENST00000547926 BEND4Q6ZU67 534 aa5.31□□□□□ -1.56
CEP290-204ENST00000547926 UBASH3BQ8TF42 649 aa5.31□□□□□ -1.56
CEP290-204ENST00000547926 FOXD4L4Q8WXT5 416 aaPredicted RBP5.31□□□□□ -1.56
CEP290-204ENST00000547926 TLR7Q9NYK1 1049 aaKnown RBP5.31□□□□□ -1.56
CEP290-204ENST00000547926 OPLAHO14841 1288 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 PREPP48147 710 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 OGFOD1Q8N543 542 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 FAM83CQ9BQN1 747 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 KCNF1Q9H3M0 494 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
CEP290-204ENST00000547926 RTN1Q16799 776 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 LACRTQ9GZZ8 138 aa5.3□□□□□ -1.56
CEP290-204ENST00000547926 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.3□□□□□ -1.56
CEP290-204ENST00000547926 FBXL6Q8N531 539 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 F13BP05160 661 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 ATP11AP98196 1134 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 WASHC4Q2M389 1173 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 COL13A1Q5TAT6 717 aaPredicted RBP5.29□□□□□ -1.56
CEP290-204ENST00000547926 CLEC10AQ8IUN9 316 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 ADAMTS19Q8TE59 1207 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 ASIC4Q96FT7 647 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 PIM2Q9P1W9 311 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 PPME1Q9Y570 386 aa5.29□□□□□ -1.56
CEP290-204ENST00000547926 PAPLNO95428 1278 aa5.28□□□□□ -1.56
CEP290-204ENST00000547926 DGKZQ13574 1117 aa5.28□□□□□ -1.56
CEP290-204ENST00000547926 TP53INP2Q8IXH6 220 aa5.28□□□□□ -1.56
CEP290-204ENST00000547926 ANGEL1Q9UNK9 670 aaKnown RBP5.28□□□□□ -1.56
CEP290-204ENST00000547926 CARMIL2Q6F5E8 1435 aa5.28□□□□□ -1.56
CEP290-204ENST00000547926 USP17L3A6NCW0 530 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 USP17L4A6NCW7 530 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 USP17L2Q6R6M4 530 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 USP17L1Q7RTZ2 530 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 CEP41Q9BYV8 373 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 RTCBQ9Y3I0 505 aaKnown RBP5.27□□□□□ -1.57
CEP290-204ENST00000547926 MICAL2O94851 1124 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 STAG2Q8N3U4 1231 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 NFATC2IPQ8NCF5 419 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 UCN2Q96RP3 112 aa5.27□□□□□ -1.57
CEP290-204ENST00000547926 QTRT2Q9H974 415 aaKnown RBP5.27□□□□□ -1.57
CEP290-204ENST00000547926 LZTS3O60299 673 aaPredicted RBP5.26□□□□□ -1.57
CEP290-204ENST00000547926 SOX11P35716 441 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 ARSDP51689 593 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 UVSSAQ2YD98 709 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.26□□□□□ -1.57
CEP290-204ENST00000547926 RGL4Q8IZJ4 473 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 KLHDC7BQ96G42 594 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 M0R2N6 131 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 XYLBO75191 536 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 GHRHP01286 108 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 EPB42P16452 691 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 DUOXA2Q1HG44 320 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 SRA1Q9HD15 236 aaKnown RBP5.26□□□□□ -1.57
CEP290-204ENST00000547926 KCNMB2Q9Y691 235 aa5.26□□□□□ -1.57
CEP290-204ENST00000547926 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 EPHA1P21709 976 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 HIF1AQ16665 826 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 SGO2Q562F6 1265 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 MAP4K3Q8IVH8 894 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 SIX5Q8N196 739 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 PRM3Q9NNZ6 103 aa5.25□□□□□ -1.57
CEP290-204ENST00000547926 SH2B1Q9NRF2 756 aaPredicted RBP5.25□□□□□ -1.57
CEP290-204ENST00000547926 MKRN1Q9UHC7 482 aaKnown RBP5.25□□□□□ -1.57
CEP290-204ENST00000547926 FOSL1P15407 271 aa5.24□□□□□ -1.57
CEP290-204ENST00000547926 TRIM50Q86XT4 487 aa5.24□□□□□ -1.57
CEP290-204ENST00000547926 CMTR1Q8N1G2 835 aaKnown RBP5.24□□□□□ -1.57
CEP290-204ENST00000547926 PAK6Q9NQU5 681 aaPredicted RBP5.24□□□□□ -1.57
CEP290-204ENST00000547926 LRFN2Q9ULH4 789 aa5.24□□□□□ -1.57
CEP290-204ENST00000547926 FSCN2O14926 492 aa5.24□□□□□ -1.57
CEP290-204ENST00000547926 LARGE2Q8N3Y3 721 aa5.24□□□□□ -1.57
CEP290-204ENST00000547926 PALM3A6NDB9 673 aaPredicted RBP5.23□□□□□ -1.57
CEP290-204ENST00000547926 POM121CA8CG34 1229 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 PRNPP04156 253 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 ADMP35318 185 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 TRIP4Q15650 581 aaPredicted RBP5.23□□□□□ -1.57
CEP290-204ENST00000547926 PSAPP07602 524 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 ATP1A2P50993 1020 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 HGSNATQ68CP4 663 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 LEMD3Q9Y2U8 911 aa5.23□□□□□ -1.57
CEP290-204ENST00000547926 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.23□□□□□ -1.57
CEP290-204ENST00000547926 EGFRP00533 1210 aa5.22□□□□□ -1.57
CEP290-204ENST00000547926 TMEM132AQ24JP5 1023 aa5.22□□□□□ -1.57
CEP290-204ENST00000547926 CEP135Q66GS9 1140 aa5.22□□□□□ -1.57
CEP290-204ENST00000547926 JUNBP17275 347 aaPredicted RBP5.21□□□□□ -1.57
CEP290-204ENST00000547926 MAP4P27816 1152 aaKnown RBP5.21□□□□□ -1.57
CEP290-204ENST00000547926 FAM26DQ5JW98 314 aa5.21□□□□□ -1.57
CEP290-204ENST00000547926 WFDC3Q8IUB2 231 aa5.21□□□□□ -1.57
CEP290-204ENST00000547926 PLEKHM2Q8IWE5 1019 aa5.21□□□□□ -1.57
CEP290-204ENST00000547926 RASSF4Q9H2L5 321 aa5.21□□□□□ -1.57
CEP290-204ENST00000547926 COG6Q9Y2V7 657 aa5.21□□□□□ -1.57
CEP290-204ENST00000547926 NLRP12P59046 1061 aa5.21□□□□□ -1.58
CEP290-204ENST00000547926 ZNF574Q6ZN55 896 aaPredicted RBP5.21□□□□□ -1.58
CEP290-204ENST00000547926 POM121Q96HA1 1249 aa5.21□□□□□ -1.58
CEP290-204ENST00000547926 SART1O43290 800 aaKnown RBP5.2□□□□□ -1.58
CEP290-204ENST00000547926 HINFPQ9BQA5 517 aa5.2□□□□□ -1.58
CEP290-204ENST00000547926 HOXD8P13378 290 aaPredicted RBP5.2□□□□□ -1.58
CEP290-204ENST00000547926 VSIG10LQ86VR7 867 aa5.2□□□□□ -1.58
CEP290-204ENST00000547926 CILP2Q8IUL8 1156 aa5.2□□□□□ -1.58
CEP290-204ENST00000547926 FLCNQ8NFG4 579 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms