RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 PLEKHF1Q96S99 279 aa17.75■□□□□ 0.43
CCDC59-202ENST00000547758 ADM5C9JUS6 153 aa17.74■□□□□ 0.43
CCDC59-202ENST00000547758 TRPA1O75762 1119 aa17.74■□□□□ 0.43
CCDC59-202ENST00000547758 EGFRP00533 1210 aa17.74■□□□□ 0.43
CCDC59-202ENST00000547758 ANXA1P04083 346 aa17.74■□□□□ 0.43
CCDC59-202ENST00000547758 ZNF157P51786 506 aaPredicted RBP17.74■□□□□ 0.43
CCDC59-202ENST00000547758 RNF186Q9NXI6 227 aa17.74■□□□□ 0.43
CCDC59-202ENST00000547758 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
CCDC59-202ENST00000547758 TSPYL4Q9UJ04 414 aa17.74■□□□□ 0.43
CCDC59-202ENST00000547758 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
CCDC59-202ENST00000547758 PSME4Q14997 1843 aa17.73■□□□□ 0.43
CCDC59-202ENST00000547758 WASHC4Q2M389 1173 aa17.73■□□□□ 0.43
CCDC59-202ENST00000547758 DCPSQ96C86 337 aaKnown RBP17.73■□□□□ 0.43
CCDC59-202ENST00000547758 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
CCDC59-202ENST00000547758 SLC10A3P09131 477 aa17.72■□□□□ 0.43
CCDC59-202ENST00000547758 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
CCDC59-202ENST00000547758 COL4A1P02462 1669 aa17.71■□□□□ 0.43
CCDC59-202ENST00000547758 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
CCDC59-202ENST00000547758 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
CCDC59-202ENST00000547758 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.43
CCDC59-202ENST00000547758 PRPF38BQ5VTL8 546 aaKnown RBP17.71■□□□□ 0.43
CCDC59-202ENST00000547758 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
CCDC59-202ENST00000547758 CTU1Q7Z7A3 348 aaKnown RBP17.71■□□□□ 0.43
CCDC59-202ENST00000547758 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.42
CCDC59-202ENST00000547758 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
CCDC59-202ENST00000547758 RIMBP2O15034 1052 aa17.7■□□□□ 0.42
CCDC59-202ENST00000547758 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
CCDC59-202ENST00000547758 CSRNP1Q96S65 589 aa17.7■□□□□ 0.42
CCDC59-202ENST00000547758 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
CCDC59-202ENST00000547758 PAPPA2Q9BXP8 1791 aa17.69■□□□□ 0.42
CCDC59-202ENST00000547758 ECE2O60344 883 aa17.69■□□□□ 0.42
CCDC59-202ENST00000547758 KIF4BQ2VIQ3 1234 aa17.69■□□□□ 0.42
CCDC59-202ENST00000547758 SULF1Q8IWU6 871 aa17.69■□□□□ 0.42
CCDC59-202ENST00000547758 GGA3Q9NZ52 723 aa17.69■□□□□ 0.42
CCDC59-202ENST00000547758 C6orf229H3BNL8 230 aa17.68■□□□□ 0.42
CCDC59-202ENST00000547758 NECTIN2Q92692 538 aa17.68■□□□□ 0.42
CCDC59-202ENST00000547758 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
CCDC59-202ENST00000547758 KCNQ5Q9NR82 932 aa17.68■□□□□ 0.42
CCDC59-202ENST00000547758 POLLQ9UGP5 575 aa17.68■□□□□ 0.42
CCDC59-202ENST00000547758 GPSM2P81274 684 aa17.67■□□□□ 0.42
CCDC59-202ENST00000547758 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
CCDC59-202ENST00000547758 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
CCDC59-202ENST00000547758 CDCA5Q96FF9 252 aa17.67■□□□□ 0.42
CCDC59-202ENST00000547758 EYA3Q99504 573 aa17.67■□□□□ 0.42
CCDC59-202ENST00000547758 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
CCDC59-202ENST00000547758 RASAL3Q86YV0 1011 aa17.66■□□□□ 0.42
CCDC59-202ENST00000547758 BABAM1Q9NWV8 329 aa17.66■□□□□ 0.42
CCDC59-202ENST00000547758 HPS5Q9UPZ3 1129 aa17.66■□□□□ 0.42
CCDC59-202ENST00000547758 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
CCDC59-202ENST00000547758 SF3B3Q15393 1217 aaKnown RBP17.65■□□□□ 0.42
CCDC59-202ENST00000547758 VIL1P09327 827 aaKnown RBP17.64■□□□□ 0.41
CCDC59-202ENST00000547758 TBC1D16Q8TBP0 767 aa17.64■□□□□ 0.41
CCDC59-202ENST00000547758 FAM89AQ96GI7 184 aa17.64■□□□□ 0.41
CCDC59-202ENST00000547758 ZNF609O15014 1411 aa17.64■□□□□ 0.41
CCDC59-202ENST00000547758 PKN2Q16513 984 aaKnown RBP17.63■□□□□ 0.41
CCDC59-202ENST00000547758 RIPK4P57078 832 aa17.62■□□□□ 0.41
CCDC59-202ENST00000547758 FKBP1BP68106 108 aa17.62■□□□□ 0.41
CCDC59-202ENST00000547758 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
CCDC59-202ENST00000547758 ZC3H12CQ9C0D7 883 aaKnown RBP17.62■□□□□ 0.41
CCDC59-202ENST00000547758 ZNF280AP59817 542 aaPredicted RBP17.61■□□□□ 0.41
CCDC59-202ENST00000547758 SCARF1Q14162 830 aa17.61■□□□□ 0.41
CCDC59-202ENST00000547758 PLBD2Q8NHP8 589 aa17.61■□□□□ 0.41
CCDC59-202ENST00000547758 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
CCDC59-202ENST00000547758 CHPF2Q9P2E5 772 aa17.61■□□□□ 0.41
CCDC59-202ENST00000547758 HDAC9Q9UKV0 1011 aa17.61■□□□□ 0.41
CCDC59-202ENST00000547758 G3V3G9 751 aa17.6■□□□□ 0.41
CCDC59-202ENST00000547758 RPS8P62241 208 aaKnown RBP17.6■□□□□ 0.41
CCDC59-202ENST00000547758 DCAF8Q5TAQ9 597 aa17.6■□□□□ 0.41
CCDC59-202ENST00000547758 AGBL3Q8NEM8 1001 aa17.6■□□□□ 0.41
CCDC59-202ENST00000547758 ZNF296Q8WUU4 475 aaPredicted RBP17.6■□□□□ 0.41
CCDC59-202ENST00000547758 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
CCDC59-202ENST00000547758 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
CCDC59-202ENST00000547758 ATP5J2-PTCD1G3V325 749 aa17.59■□□□□ 0.41
CCDC59-202ENST00000547758 UFL1O94874 794 aa17.59■□□□□ 0.41
CCDC59-202ENST00000547758 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
CCDC59-202ENST00000547758 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
CCDC59-202ENST00000547758 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
CCDC59-202ENST00000547758 RSBN1LQ6PCB5 846 aaPredicted RBP17.59■□□□□ 0.41
CCDC59-202ENST00000547758 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
CCDC59-202ENST00000547758 ZNF646O15015 1829 aaPredicted RBP17.58■□□□□ 0.41
CCDC59-202ENST00000547758 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
CCDC59-202ENST00000547758 TBC1D8O95759 1140 aa17.58■□□□□ 0.4
CCDC59-202ENST00000547758 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
CCDC59-202ENST00000547758 SPEF2Q9C093 1822 aa17.58■□□□□ 0.4
CCDC59-202ENST00000547758 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
CCDC59-202ENST00000547758 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
CCDC59-202ENST00000547758 MOB2Q70IA6 237 aa17.57■□□□□ 0.4
CCDC59-202ENST00000547758 MYOZ2Q9NPC6 264 aa17.57■□□□□ 0.4
CCDC59-202ENST00000547758 GGA1Q9UJY5 639 aa17.57■□□□□ 0.4
CCDC59-202ENST00000547758 MKI67P46013 3256 aaKnown RBP17.57■□□□□ 0.4
CCDC59-202ENST00000547758 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
CCDC59-202ENST00000547758 GMLQ99445 158 aa17.56■□□□□ 0.4
CCDC59-202ENST00000547758 SEC31BQ9NQW1 1179 aa17.56■□□□□ 0.4
CCDC59-202ENST00000547758 MYH3P11055 1940 aa17.55■□□□□ 0.4
CCDC59-202ENST00000547758 UBE2Q2LH0YL09 131 aa17.55■□□□□ 0.4
CCDC59-202ENST00000547758 GPR25O00155 361 aa17.55■□□□□ 0.4
CCDC59-202ENST00000547758 CHL1O00533 1208 aa17.55■□□□□ 0.4
CCDC59-202ENST00000547758 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
CCDC59-202ENST00000547758 NOM1Q5C9Z4 860 aaKnown RBP17.55■□□□□ 0.4
CCDC59-202ENST00000547758 FBXO46Q6PJ61 603 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms