RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 MASTLQ96GX5 879 aa20.2■□□□□ 0.82
CHMP1A-204ENST00000547687 NYXQ9GZU5 481 aa20.2■□□□□ 0.82
CHMP1A-204ENST00000547687 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
CHMP1A-204ENST00000547687 PRELPP51888 382 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 OLFM4Q6UX06 510 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 C3orf67Q6ZVT6 689 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 RHPN1Q8TCX5 695 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 IL1RAPL2Q9NP60 686 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 RABL6Q3YEC7 729 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 RNF181Q9P0P0 153 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 STAP2Q9UGK3 403 aa20.19■□□□□ 0.82
CHMP1A-204ENST00000547687 LAMB2P55268 1798 aa20.18■□□□□ 0.82
CHMP1A-204ENST00000547687 STYK1Q6J9G0 422 aa20.18■□□□□ 0.82
CHMP1A-204ENST00000547687 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
CHMP1A-204ENST00000547687 TAF1P21675 1872 aa20.18■□□□□ 0.82
CHMP1A-204ENST00000547687 FOXO4P98177 505 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 OS9Q13438 667 aaPredicted RBP20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 KIF1BPQ96EK5 621 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 USP26Q9BXU7 913 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 NFKBIEO00221 500 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 DEKP35659 375 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 KLHDC4Q8TBB5 520 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 CNKSR1Q969H4 720 aa20.17■□□□□ 0.82
CHMP1A-204ENST00000547687 KLRG2A4D1S0 409 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-204ENST00000547687 NPR1P16066 1061 aa20.16■□□□□ 0.82
CHMP1A-204ENST00000547687 LMBR1LQ6UX01 489 aa20.16■□□□□ 0.82
CHMP1A-204ENST00000547687 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
CHMP1A-204ENST00000547687 GPBP1L1Q9HC44 474 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-204ENST00000547687 FRAT2O75474 233 aaPredicted RBP20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 PARP10Q53GL7 1025 aa20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 CEP350Q5VT06 3117 aa20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 PCCAP05165 728 aaPredicted RBP20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 RFX5P48382 616 aaPredicted RBP20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 TIAM2Q8IVF5 1701 aa20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 AOX1Q06278 1338 aa20.15■□□□□ 0.82
CHMP1A-204ENST00000547687 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 ZBTB38Q8NAP3 1195 aaPredicted RBP20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 SIL1Q9H173 461 aa20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 ERC2O15083 957 aa20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 REC8O95072 547 aa20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 G3BP1Q13283 466 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
CHMP1A-204ENST00000547687 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-204ENST00000547687 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-204ENST00000547687 CHMP3Q9Y3E7 222 aa20.13■□□□□ 0.81
CHMP1A-204ENST00000547687 DICER1Q9UPY3 1922 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-204ENST00000547687 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 CRY2Q49AN0 593 aa20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 ERC1Q8IUD2 1116 aa20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 COPRSQ9NQ92 184 aa20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 SASH1O94885 1247 aa20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 RPGRQ92834 1020 aaKnown RBP20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 RILPL2Q969X0 211 aa20.12■□□□□ 0.81
CHMP1A-204ENST00000547687 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
CHMP1A-204ENST00000547687 LMNB1P20700 586 aa20.1■□□□□ 0.81
CHMP1A-204ENST00000547687 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
CHMP1A-204ENST00000547687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.1■□□□□ 0.81
CHMP1A-204ENST00000547687 RABEP1Q15276 862 aa20.1■□□□□ 0.81
CHMP1A-204ENST00000547687 CLASRPQ8N2M8 674 aaKnown RBP20.1■□□□□ 0.81
CHMP1A-204ENST00000547687 NLRP3Q96P20 1036 aa20.09■□□□□ 0.81
CHMP1A-204ENST00000547687 NMRK2Q9NPI5 230 aa20.09■□□□□ 0.81
CHMP1A-204ENST00000547687 PLA2G12BQ9BX93 195 aa20.09■□□□□ 0.81
CHMP1A-204ENST00000547687 TAOK3Q9H2K8 898 aa20.09■□□□□ 0.81
CHMP1A-204ENST00000547687 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.81
CHMP1A-204ENST00000547687 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.81
CHMP1A-204ENST00000547687 RIC1Q4ADV7 1423 aa20.08■□□□□ 0.81
CHMP1A-204ENST00000547687 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.8
CHMP1A-204ENST00000547687 CHMLP26374 656 aa20.08■□□□□ 0.8
CHMP1A-204ENST00000547687 ALDH1B1P30837 517 aa20.08■□□□□ 0.8
CHMP1A-204ENST00000547687 ESYT1Q9BSJ8 1104 aa20.08■□□□□ 0.8
CHMP1A-204ENST00000547687 K7ELQ4 463 aaPredicted RBP20.07■□□□□ 0.8
CHMP1A-204ENST00000547687 SLC10A5Q5PT55 438 aa20.07■□□□□ 0.8
CHMP1A-204ENST00000547687 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
CHMP1A-204ENST00000547687 PI4K2BQ8TCG2 481 aa20.07■□□□□ 0.8
CHMP1A-204ENST00000547687 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-204ENST00000547687 IRS4O14654 1257 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-204ENST00000547687 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-204ENST00000547687 ZNF277Q9NRM2 450 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-204ENST00000547687 MYH3P11055 1940 aa20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 CSF1RP07333 972 aa20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 HOXA10P31260 410 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 AACSQ86V21 672 aa20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 EAF2Q96CJ1 260 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 COL4A1P02462 1669 aa20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-204ENST00000547687 KIF3CO14782 793 aa20.04■□□□□ 0.8
CHMP1A-204ENST00000547687 IFIT2P09913 472 aaKnown RBP20.04■□□□□ 0.8
CHMP1A-204ENST00000547687 DDIT3P35638 169 aa20.04■□□□□ 0.8
CHMP1A-204ENST00000547687 PPEF1O14829 653 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 TFCP2Q12800 502 aa20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 CCDC57Q2TAC2 916 aa20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms