RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
CPSF6-204ENST00000547486 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
CPSF6-204ENST00000547486 RASSF10A6NK89 507 aa17.13■□□□□ 0.33
CPSF6-204ENST00000547486 ECE2O60344 883 aa17.13■□□□□ 0.33
CPSF6-204ENST00000547486 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
CPSF6-204ENST00000547486 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
CPSF6-204ENST00000547486 H7C1W4 665 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 CTSWP56202 376 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
CPSF6-204ENST00000547486 FLIIQ13045 1269 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 MICALL2Q8IY33 904 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 EYA3Q99504 573 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 ABT1Q9ULW3 272 aaKnown RBP17.12■□□□□ 0.33
CPSF6-204ENST00000547486 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
CPSF6-204ENST00000547486 UFL1O94874 794 aa17.11■□□□□ 0.33
CPSF6-204ENST00000547486 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
CPSF6-204ENST00000547486 ANKRD18AQ8IVF6 992 aa17.11■□□□□ 0.33
CPSF6-204ENST00000547486 DPF2Q92785 391 aa17.11■□□□□ 0.33
CPSF6-204ENST00000547486 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
CPSF6-204ENST00000547486 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
CPSF6-204ENST00000547486 GREM2Q9H772 168 aa17.11■□□□□ 0.33
CPSF6-204ENST00000547486 H7C1D1 291 aa17.1■□□□□ 0.33
CPSF6-204ENST00000547486 EGFRP00533 1210 aa17.1■□□□□ 0.33
CPSF6-204ENST00000547486 GCKRQ14397 625 aa17.1■□□□□ 0.33
CPSF6-204ENST00000547486 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
CPSF6-204ENST00000547486 GGA1Q9UJY5 639 aa17.1■□□□□ 0.33
CPSF6-204ENST00000547486 FOXN1O15353 648 aa17.09■□□□□ 0.33
CPSF6-204ENST00000547486 CASP7P55210 303 aa17.09■□□□□ 0.33
CPSF6-204ENST00000547486 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
CPSF6-204ENST00000547486 DLK2Q6UY11 383 aa17.09■□□□□ 0.33
CPSF6-204ENST00000547486 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
CPSF6-204ENST00000547486 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
CPSF6-204ENST00000547486 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.32
CPSF6-204ENST00000547486 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
CPSF6-204ENST00000547486 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.32
CPSF6-204ENST00000547486 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
CPSF6-204ENST00000547486 MINPP1Q9UNW1 487 aa17.08■□□□□ 0.32
CPSF6-204ENST00000547486 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
CPSF6-204ENST00000547486 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
CPSF6-204ENST00000547486 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
CPSF6-204ENST00000547486 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
CPSF6-204ENST00000547486 TLL2Q9Y6L7 1015 aa17.07■□□□□ 0.32
CPSF6-204ENST00000547486 XDHP47989 1333 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 ATP2B4P23634 1241 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 RPS12P25398 132 aaKnown RBP17.06■□□□□ 0.32
CPSF6-204ENST00000547486 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
CPSF6-204ENST00000547486 CYP4F22Q6NT55 531 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 TNS4Q8IZW8 715 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
CPSF6-204ENST00000547486 F6X3S4 739 aa17.05■□□□□ 0.32
CPSF6-204ENST00000547486 G3V3G9 751 aa17.05■□□□□ 0.32
CPSF6-204ENST00000547486 CSF1RP07333 972 aa17.05■□□□□ 0.32
CPSF6-204ENST00000547486 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
CPSF6-204ENST00000547486 SAPCD2Q86UD0 394 aa17.05■□□□□ 0.32
CPSF6-204ENST00000547486 CAPNS2Q96L46 248 aa17.05■□□□□ 0.32
CPSF6-204ENST00000547486 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
CPSF6-204ENST00000547486 ITGA6P23229 1130 aa17.03■□□□□ 0.32
CPSF6-204ENST00000547486 GRM1Q13255 1194 aa17.03■□□□□ 0.32
CPSF6-204ENST00000547486 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
CPSF6-204ENST00000547486 BEND3Q5T5X7 828 aa17.03■□□□□ 0.32
CPSF6-204ENST00000547486 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
CPSF6-204ENST00000547486 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
CPSF6-204ENST00000547486 GMLQ99445 158 aa17.03■□□□□ 0.32
CPSF6-204ENST00000547486 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
CPSF6-204ENST00000547486 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
CPSF6-204ENST00000547486 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
CPSF6-204ENST00000547486 PODNQ7Z5L7 613 aa17.02■□□□□ 0.32
CPSF6-204ENST00000547486 TXNRD3Q86VQ6 643 aa17.02■□□□□ 0.32
CPSF6-204ENST00000547486 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
CPSF6-204ENST00000547486 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 AOC2O75106 756 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
CPSF6-204ENST00000547486 ECE1P42892 770 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 CTCFP49711 727 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-204ENST00000547486 ZNF280AP59817 542 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-204ENST00000547486 FOXO4P98177 505 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 MAP2K1Q02750 393 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-204ENST00000547486 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 KRT26Q7Z3Y9 468 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
CPSF6-204ENST00000547486 USP17L3A6NCW0 530 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 USP17L4A6NCW7 530 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 ADM5C9JUS6 153 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 CAPN15O75808 1086 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 KLRK1P26718 216 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 LBX1P52954 281 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 MXD3Q9BW11 206 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 MED23Q9ULK4 1368 aa17■□□□□ 0.31
CPSF6-204ENST00000547486 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
CPSF6-204ENST00000547486 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
CPSF6-204ENST00000547486 DCPSQ96C86 337 aaKnown RBP16.99■□□□□ 0.31
CPSF6-204ENST00000547486 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms