RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.41
NPAS3-205ENST00000547068 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
NPAS3-205ENST00000547068 UBXN4Q92575 508 aa12.52□□□□□ -0.41
NPAS3-205ENST00000547068 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
NPAS3-205ENST00000547068 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
NPAS3-205ENST00000547068 LTN1O94822 1766 aa12.52□□□□□ -0.41
NPAS3-205ENST00000547068 GPS2Q13227 327 aa12.51□□□□□ -0.41
NPAS3-205ENST00000547068 E4F1Q66K89 784 aaPredicted RBP12.51□□□□□ -0.41
NPAS3-205ENST00000547068 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
NPAS3-205ENST00000547068 PRDM11Q9NQV5 511 aa12.51□□□□□ -0.41
NPAS3-205ENST00000547068 CRB1P82279 1406 aa12.51□□□□□ -0.41
NPAS3-205ENST00000547068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
NPAS3-205ENST00000547068 GORABQ5T7V8 394 aa12.51□□□□□ -0.41
NPAS3-205ENST00000547068 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
NPAS3-205ENST00000547068 ST5P78524 1137 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 KCNB2Q92953 911 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 ORC3Q9UBD5 711 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 CTAGE5O15320 804 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 EIF4A2Q14240 407 aaKnown RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 PPP1R42Q7Z4L9 355 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 DHX40Q8IX18 779 aaKnown RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 CPDO75976 1380 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-205ENST00000547068 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
NPAS3-205ENST00000547068 TUBB4AP04350 444 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 ZSCAN26Q16670 478 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 LTV1Q96GA3 475 aaPredicted RBP12.49□□□□□ -0.41
NPAS3-205ENST00000547068 OSBPL5Q9H0X9 879 aaPredicted RBP12.49□□□□□ -0.41
NPAS3-205ENST00000547068 MYO1CO00159 1063 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 PSMA5P28066 241 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
NPAS3-205ENST00000547068 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 C10orf67Q8IYJ2 551 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 IMPACTQ9P2X3 320 aa12.49□□□□□ -0.41
NPAS3-205ENST00000547068 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 GIGYF1O75420 1035 aaPredicted RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 GLRX3O76003 335 aaKnown RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 SEC31AO94979 1220 aaKnown RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 ANKRD1Q15327 319 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 MNS1Q8NEH6 495 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 ANO10Q9NW15 660 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 CWC15Q9P013 229 aaKnown RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 OAS2P29728 719 aaKnown RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 AOPEPQ8N6M6 819 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
NPAS3-205ENST00000547068 CFAP45Q9UL16 551 aa12.48□□□□□ -0.41
NPAS3-205ENST00000547068 SPATA31A6Q5VVP1 1343 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 A0A087WWV3 80 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 TRIM66O15016 1216 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 NRDCO43847 1150 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 STK3Q13188 491 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 POLA2Q14181 598 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 DNAI1Q9UI46 699 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 ABCA3Q99758 1704 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 MAP3K5Q99683 1374 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 SRGAP3O43295 1099 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 TPM1P09493 284 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 SFPQP23246 707 aaKnown RBP eCLIP12.47□□□□□ -0.41
NPAS3-205ENST00000547068 CEBPZQ03701 1054 aaKnown RBP12.47□□□□□ -0.41
NPAS3-205ENST00000547068 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 CCAR1Q8IX12 1150 aaKnown RBP12.47□□□□□ -0.41
NPAS3-205ENST00000547068 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
NPAS3-205ENST00000547068 ADCY9O60503 1353 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 EVA1CP58658 441 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 ETF1P62495 437 aaKnown RBP12.46□□□□□ -0.41
NPAS3-205ENST00000547068 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
NPAS3-205ENST00000547068 SMC1AQ14683 1233 aaKnown RBP12.46□□□□□ -0.41
NPAS3-205ENST00000547068 ARMCX5Q6P1M9 558 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 ZBTB9Q96C00 473 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 SRRTQ9BXP5 876 aaKnown RBP12.46□□□□□ -0.41
NPAS3-205ENST00000547068 NAT10Q9H0A0 1025 aaKnown RBP12.46□□□□□ -0.41
NPAS3-205ENST00000547068 LCMT1Q9UIC8 334 aa12.46□□□□□ -0.41
NPAS3-205ENST00000547068 PHLPP2Q6ZVD8 1323 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 H3BQV1 296 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 CASQ1P31415 396 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms