RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 G3V3G9 751 aa25.93■■□□□ 1.74
SCN8A-204ENST00000546961 DCAF8Q5TAQ9 597 aa25.93■■□□□ 1.74
SCN8A-204ENST00000546961 CCDC85AQ96PX6 553 aaPredicted RBP25.93■■□□□ 1.74
SCN8A-204ENST00000546961 ANKIB1Q9P2G1 1089 aa25.93■■□□□ 1.74
SCN8A-204ENST00000546961 DUOX1Q9NRD9 1551 aa25.93■■□□□ 1.74
SCN8A-204ENST00000546961 TRPM7Q96QT4 1865 aa25.93■■□□□ 1.74
SCN8A-204ENST00000546961 PCCAP05165 728 aaPredicted RBP25.92■■□□□ 1.74
SCN8A-204ENST00000546961 CCDC30Q5VVM6 783 aa25.92■■□□□ 1.74
SCN8A-204ENST00000546961 CWC25Q9NXE8 425 aaPredicted RBP25.92■■□□□ 1.74
SCN8A-204ENST00000546961 TSKSQ9UJT2 592 aa25.92■■□□□ 1.74
SCN8A-204ENST00000546961 DDX60Q8IY21 1712 aaKnown RBP25.91■■□□□ 1.74
SCN8A-204ENST00000546961 PDE8AO60658 829 aa25.91■■□□□ 1.74
SCN8A-204ENST00000546961 DDX58O95786 925 aaKnown RBP25.91■■□□□ 1.74
SCN8A-204ENST00000546961 RPS12P25398 132 aaKnown RBP25.91■■□□□ 1.74
SCN8A-204ENST00000546961 CCDC152Q4G0S7 254 aa25.91■■□□□ 1.74
SCN8A-204ENST00000546961 HHIPL1Q96JK4 782 aa25.91■■□□□ 1.74
SCN8A-204ENST00000546961 METTL22Q9BUU2 404 aaPredicted RBP25.91■■□□□ 1.74
SCN8A-204ENST00000546961 PODXL2Q9NZ53 605 aa25.91■■□□□ 1.74
SCN8A-204ENST00000546961 UFL1O94874 794 aa25.9■■□□□ 1.74
SCN8A-204ENST00000546961 EGFRP00533 1210 aa25.9■■□□□ 1.74
SCN8A-204ENST00000546961 KRT26Q7Z3Y9 468 aa25.9■■□□□ 1.74
SCN8A-204ENST00000546961 CHMP4AQ9BY43 222 aa25.9■■□□□ 1.74
SCN8A-204ENST00000546961 GGA1Q9UJY5 639 aa25.9■■□□□ 1.74
SCN8A-204ENST00000546961 ABHD8Q96I13 439 aa25.89■■□□□ 1.74
SCN8A-204ENST00000546961 RTL9Q8NET4 1388 aa25.89■■□□□ 1.74
SCN8A-204ENST00000546961 COL4A1P02462 1669 aa25.88■■□□□ 1.73
SCN8A-204ENST00000546961 VIL1P09327 827 aaKnown RBP25.88■■□□□ 1.73
SCN8A-204ENST00000546961 TSPYL6Q8N831 410 aa25.88■■□□□ 1.73
SCN8A-204ENST00000546961 DCPSQ96C86 337 aaKnown RBP25.88■■□□□ 1.73
SCN8A-204ENST00000546961 MAP3K2Q9Y2U5 619 aa25.88■■□□□ 1.73
SCN8A-204ENST00000546961 HUNKP57058 714 aa25.87■■□□□ 1.73
SCN8A-204ENST00000546961 LRRC37AA6NMS7 1700 aa25.86■■□□□ 1.73
SCN8A-204ENST00000546961 ANKRD18AQ8IVF6 992 aa25.86■■□□□ 1.73
SCN8A-204ENST00000546961 KSR2Q6VAB6 950 aa25.85■■□□□ 1.73
SCN8A-204ENST00000546961 PI4KAP2A4QPH2 592 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 ADM5C9JUS6 153 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 CA12O43570 354 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 BRPF1P55201 1214 aaPredicted RBP25.84■■□□□ 1.73
SCN8A-204ENST00000546961 KIF4BQ2VIQ3 1234 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 PI4KAP1Q8N8J0 262 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 C2orf69Q8N8R5 385 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 TSR2Q969E8 191 aaKnown RBP25.84■■□□□ 1.73
SCN8A-204ENST00000546961 ZIC5Q96T25 663 aa25.84■■□□□ 1.73
SCN8A-204ENST00000546961 GBA2Q9HCG7 927 aaPredicted RBP25.83■■□□□ 1.73
SCN8A-204ENST00000546961 IGKV5-2P06315 115 aa25.82■■□□□ 1.72
SCN8A-204ENST00000546961 NOGQ13253 232 aa25.82■■□□□ 1.72
SCN8A-204ENST00000546961 STK31Q9BXU1 1019 aa25.82■■□□□ 1.72
SCN8A-204ENST00000546961 NEXNQ0ZGT2 675 aa25.81■■□□□ 1.72
SCN8A-204ENST00000546961 CCDC184Q52MB2 194 aa25.81■■□□□ 1.72
SCN8A-204ENST00000546961 RGMBQ6NW40 437 aa25.81■■□□□ 1.72
SCN8A-204ENST00000546961 RSBN1LQ6PCB5 846 aaPredicted RBP25.81■■□□□ 1.72
SCN8A-204ENST00000546961 SULF1Q8IWU6 871 aa25.81■■□□□ 1.72
SCN8A-204ENST00000546961 ASTN2O75129 1339 aaPredicted RBP25.81■■□□□ 1.72
SCN8A-204ENST00000546961 XDHP47989 1333 aa25.81■■□□□ 1.72
SCN8A-204ENST00000546961 CCDC85CA6NKD9 419 aa25.8■■□□□ 1.72
SCN8A-204ENST00000546961 ATP2B4P23634 1241 aa25.8■■□□□ 1.72
SCN8A-204ENST00000546961 AGBL3Q8NEM8 1001 aa25.8■■□□□ 1.72
SCN8A-204ENST00000546961 CDC5LQ99459 802 aaKnown RBP25.8■■□□□ 1.72
SCN8A-204ENST00000546961 POLR2AP24928 1970 aaKnown RBP25.79■■□□□ 1.72
SCN8A-204ENST00000546961 THSD7BQ9C0I4 1608 aa25.79■■□□□ 1.72
SCN8A-204ENST00000546961 WTIPA6NIX2 430 aaPredicted RBP25.79■■□□□ 1.72
SCN8A-204ENST00000546961 CTSWP56202 376 aa25.79■■□□□ 1.72
SCN8A-204ENST00000546961 SCARF1Q14162 830 aa25.79■■□□□ 1.72
SCN8A-204ENST00000546961 TTLL11Q8NHH1 800 aa25.79■■□□□ 1.72
SCN8A-204ENST00000546961 GGA3Q9NZ52 723 aa25.79■■□□□ 1.72
SCN8A-204ENST00000546961 USP17L3A6NCW0 530 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 USP17L4A6NCW7 530 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 ZNF157P51786 506 aaPredicted RBP25.77■■□□□ 1.72
SCN8A-204ENST00000546961 ZNF280AP59817 542 aaPredicted RBP25.77■■□□□ 1.72
SCN8A-204ENST00000546961 CWF19L2Q2TBE0 894 aaKnown RBP25.77■■□□□ 1.72
SCN8A-204ENST00000546961 G2E3Q7L622 706 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 USP17L1Q7RTZ2 530 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 PODNQ7Z5L7 613 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 WWC1Q8IX03 1113 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 CCDC102AQ96A19 550 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 GREM2Q9H772 168 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 MINPP1Q9UNW1 487 aa25.77■■□□□ 1.72
SCN8A-204ENST00000546961 USP17L8P0C7I0 530 aa25.76■■□□□ 1.71
SCN8A-204ENST00000546961 TWISTNBQ3B726 338 aaPredicted RBP25.76■■□□□ 1.71
SCN8A-204ENST00000546961 ANGEL2Q5VTE6 544 aaKnown RBP25.76■■□□□ 1.71
SCN8A-204ENST00000546961 BSDC1Q9NW68 430 aaPredicted RBP25.76■■□□□ 1.71
SCN8A-204ENST00000546961 NEURL1BA8MQ27 555 aa25.75■■□□□ 1.71
SCN8A-204ENST00000546961 FAM155AB1AL88 458 aaPredicted RBP25.75■■□□□ 1.71
SCN8A-204ENST00000546961 KIF23Q02241 960 aaPredicted RBP25.75■■□□□ 1.71
SCN8A-204ENST00000546961 CCDC27Q2M243 656 aa25.75■■□□□ 1.71
SCN8A-204ENST00000546961 CDCA5Q96FF9 252 aa25.75■■□□□ 1.71
SCN8A-204ENST00000546961 GMLQ99445 158 aa25.75■■□□□ 1.71
SCN8A-204ENST00000546961 H7C1W4 665 aa25.74■■□□□ 1.71
SCN8A-204ENST00000546961 UBE3BQ7Z3V4 1068 aa25.74■■□□□ 1.71
SCN8A-204ENST00000546961 MYOZ2Q9NPC6 264 aa25.74■■□□□ 1.71
SCN8A-204ENST00000546961 SCN9AQ15858 1988 aa25.74■■□□□ 1.71
SCN8A-204ENST00000546961 MCOLN1Q9GZU1 580 aa25.73■■□□□ 1.71
SCN8A-204ENST00000546961 CCT4P50991 539 aaKnown RBP25.72■■□□□ 1.71
SCN8A-204ENST00000546961 FBXW7Q969H0 707 aa25.71■■□□□ 1.71
SCN8A-204ENST00000546961 CASP8AP2Q9UKL3 1982 aa25.71■■□□□ 1.71
SCN8A-204ENST00000546961 IGHMBP2P38935 993 aaKnown RBP25.7■■□□□ 1.7
SCN8A-204ENST00000546961 DGKZQ13574 1117 aa25.7■■□□□ 1.7
SCN8A-204ENST00000546961 MXD3Q9BW11 206 aa25.7■■□□□ 1.7
SCN8A-204ENST00000546961 SCAF8Q9UPN6 1271 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms