RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 GPC2Q8N158 579 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
NOVA1-207ENST00000546546 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
NOVA1-207ENST00000546546 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 TIAM2Q8IVF5 1701 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 XDHP47989 1333 aa16.44■□□□□ 0.22
NOVA1-207ENST00000546546 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
NOVA1-207ENST00000546546 IQCA1LA6NCM1 817 aa16.43■□□□□ 0.22
NOVA1-207ENST00000546546 BRPF1P55201 1214 aaPredicted RBP16.43■□□□□ 0.22
NOVA1-207ENST00000546546 CXCL9Q07325 125 aa16.43■□□□□ 0.22
NOVA1-207ENST00000546546 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
NOVA1-207ENST00000546546 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
NOVA1-207ENST00000546546 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
NOVA1-207ENST00000546546 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
NOVA1-207ENST00000546546 HACL1Q9UJ83 578 aa16.43■□□□□ 0.22
NOVA1-207ENST00000546546 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
NOVA1-207ENST00000546546 YDJCA8MPS7 323 aa16.42■□□□□ 0.22
NOVA1-207ENST00000546546 ATP2B4P23634 1241 aa16.42■□□□□ 0.22
NOVA1-207ENST00000546546 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
NOVA1-207ENST00000546546 CIAPIN1Q6FI81 312 aa16.42■□□□□ 0.22
NOVA1-207ENST00000546546 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
NOVA1-207ENST00000546546 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
NOVA1-207ENST00000546546 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
NOVA1-207ENST00000546546 UTYO14607 1347 aa16.42■□□□□ 0.22
NOVA1-207ENST00000546546 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
NOVA1-207ENST00000546546 PLIN1O60240 522 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 ECE2O60344 883 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
NOVA1-207ENST00000546546 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
NOVA1-207ENST00000546546 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
NOVA1-207ENST00000546546 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 TAF5LO75529 589 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 EPHX2P34913 555 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 EPS15P42566 896 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 KCNJ4P48050 445 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 CHRNDQ07001 517 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 TNIP1Q15025 636 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 CNNM1Q9NRU3 951 aa16.4■□□□□ 0.22
NOVA1-207ENST00000546546 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
NOVA1-207ENST00000546546 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
NOVA1-207ENST00000546546 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
NOVA1-207ENST00000546546 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
NOVA1-207ENST00000546546 ANKRD2Q9GZV1 360 aa16.39■□□□□ 0.21
NOVA1-207ENST00000546546 SNAP23O00161 211 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 PSMD14O00487 310 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 TRIM27P14373 513 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 HSPA6P17066 643 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 SCNN1DP51172 638 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 FSTL1Q12841 308 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 ANKRD44Q8N8A2 993 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
NOVA1-207ENST00000546546 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
NOVA1-207ENST00000546546 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
NOVA1-207ENST00000546546 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
NOVA1-207ENST00000546546 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
NOVA1-207ENST00000546546 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 KLRK1P26718 216 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
NOVA1-207ENST00000546546 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
NOVA1-207ENST00000546546 TXNRD3Q86VQ6 643 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 FBXW7Q969H0 707 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 MEIS3Q99687 375 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
NOVA1-207ENST00000546546 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
NOVA1-207ENST00000546546 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
NOVA1-207ENST00000546546 LDHDQ86WU2 507 aa16.35■□□□□ 0.21
NOVA1-207ENST00000546546 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
NOVA1-207ENST00000546546 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
NOVA1-207ENST00000546546 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
NOVA1-207ENST00000546546 HTRA3P83110 453 aa16.34■□□□□ 0.21
NOVA1-207ENST00000546546 LRRC24Q50LG9 513 aa16.34■□□□□ 0.21
NOVA1-207ENST00000546546 H7C1D1 291 aa16.33■□□□□ 0.2
NOVA1-207ENST00000546546 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
NOVA1-207ENST00000546546 MAP1SQ66K74 1059 aaPredicted RBP16.33■□□□□ 0.2
NOVA1-207ENST00000546546 MICALL2Q8IY33 904 aa16.33■□□□□ 0.2
NOVA1-207ENST00000546546 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.2
NOVA1-207ENST00000546546 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
NOVA1-207ENST00000546546 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
NOVA1-207ENST00000546546 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
NOVA1-207ENST00000546546 APLP1P51693 650 aa16.32■□□□□ 0.2
NOVA1-207ENST00000546546 PODNQ7Z5L7 613 aa16.32■□□□□ 0.2
NOVA1-207ENST00000546546 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
NOVA1-207ENST00000546546 ADARB2Q9NS39 739 aaKnown RBP16.32■□□□□ 0.2
NOVA1-207ENST00000546546 USP17L3A6NCW0 530 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 USP17L4A6NCW7 530 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 GNAI3P08754 354 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms