RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TNRC18O15417 2968 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-221ENST00000546229 FAM155AB1AL88 458 aaPredicted RBP16.3■□□□□ 0.2
COPS7A-221ENST00000546229 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
COPS7A-221ENST00000546229 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
COPS7A-221ENST00000546229 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
COPS7A-221ENST00000546229 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
COPS7A-221ENST00000546229 MYD88Q99836 296 aa16.3■□□□□ 0.2
COPS7A-221ENST00000546229 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
COPS7A-221ENST00000546229 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
COPS7A-221ENST00000546229 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
COPS7A-221ENST00000546229 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 H7C1D1 291 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 GNAI1P63096 354 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 GRM1Q13255 1194 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
COPS7A-221ENST00000546229 PAXIP1Q6ZW49 1069 aaPredicted RBP16.29■□□□□ 0.2
COPS7A-221ENST00000546229 USP48Q86UV5 1035 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 GMLQ99445 158 aa16.29■□□□□ 0.2
COPS7A-221ENST00000546229 CASP8AP2Q9UKL3 1982 aa16.28■□□□□ 0.2
COPS7A-221ENST00000546229 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
COPS7A-221ENST00000546229 ZNF280AP59817 542 aaPredicted RBP16.28■□□□□ 0.2
COPS7A-221ENST00000546229 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
COPS7A-221ENST00000546229 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
COPS7A-221ENST00000546229 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
COPS7A-221ENST00000546229 ELL2O00472 640 aaPredicted RBP16.27■□□□□ 0.2
COPS7A-221ENST00000546229 PDE8AO60658 829 aa16.27■□□□□ 0.2
COPS7A-221ENST00000546229 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
COPS7A-221ENST00000546229 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
COPS7A-221ENST00000546229 EYA3Q99504 573 aa16.27■□□□□ 0.2
COPS7A-221ENST00000546229 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.2
COPS7A-221ENST00000546229 PAPPA2Q9BXP8 1791 aa16.27■□□□□ 0.2
COPS7A-221ENST00000546229 CA12O43570 354 aa16.26■□□□□ 0.19
COPS7A-221ENST00000546229 UFL1O94874 794 aa16.26■□□□□ 0.19
COPS7A-221ENST00000546229 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
COPS7A-221ENST00000546229 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
COPS7A-221ENST00000546229 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
COPS7A-221ENST00000546229 CTSWP56202 376 aa16.25■□□□□ 0.19
COPS7A-221ENST00000546229 HUNKP57058 714 aa16.25■□□□□ 0.19
COPS7A-221ENST00000546229 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
COPS7A-221ENST00000546229 NOGQ13253 232 aa16.25■□□□□ 0.19
COPS7A-221ENST00000546229 CCDC152Q4G0S7 254 aa16.25■□□□□ 0.19
COPS7A-221ENST00000546229 GGA3Q9NZ52 723 aa16.25■□□□□ 0.19
COPS7A-221ENST00000546229 GGA1Q9UJY5 639 aa16.25■□□□□ 0.19
COPS7A-221ENST00000546229 XDHP47989 1333 aa16.24■□□□□ 0.19
COPS7A-221ENST00000546229 RSBN1LQ6PCB5 846 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-221ENST00000546229 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-221ENST00000546229 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
COPS7A-221ENST00000546229 MED23Q9ULK4 1368 aa16.24■□□□□ 0.19
COPS7A-221ENST00000546229 RGS19P49795 217 aa16.23■□□□□ 0.19
COPS7A-221ENST00000546229 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
COPS7A-221ENST00000546229 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
COPS7A-221ENST00000546229 TSR2Q969E8 191 aaKnown RBP16.23■□□□□ 0.19
COPS7A-221ENST00000546229 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
COPS7A-221ENST00000546229 BEGAINQ9BUH8 593 aa16.23■□□□□ 0.19
COPS7A-221ENST00000546229 HTTP42858 3142 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 PI4KAP2A4QPH2 592 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 SLC10A3P09131 477 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 CASP7P55210 303 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 CCDC30Q5VVM6 783 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 G2E3Q7L622 706 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 PI4KAP1Q8N8J0 262 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 AGBL3Q8NEM8 1001 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 ZC3H12CQ9C0D7 883 aaKnown RBP16.22■□□□□ 0.19
COPS7A-221ENST00000546229 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 GREM2Q9H772 168 aa16.22■□□□□ 0.19
COPS7A-221ENST00000546229 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
COPS7A-221ENST00000546229 CWF19L2Q2TBE0 894 aaKnown RBP16.21■□□□□ 0.19
COPS7A-221ENST00000546229 CDCA5Q96FF9 252 aa16.21■□□□□ 0.19
COPS7A-221ENST00000546229 ANKIB1Q9P2G1 1089 aa16.21■□□□□ 0.19
COPS7A-221ENST00000546229 LAMB1P07942 1786 aa16.21■□□□□ 0.18
COPS7A-221ENST00000546229 PITPNM2Q9BZ72 1349 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 IRS2Q9Y4H2 1338 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 CACNA1FO60840 1977 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 AKAP11Q9UKA4 1901 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 NEURL1BA8MQ27 555 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
COPS7A-221ENST00000546229 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
COPS7A-221ENST00000546229 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 DCPSQ96C86 337 aaKnown RBP16.2■□□□□ 0.18
COPS7A-221ENST00000546229 SAGE1Q9NXZ1 904 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 MINPP1Q9UNW1 487 aa16.2■□□□□ 0.18
COPS7A-221ENST00000546229 H7C1W4 665 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 DACT2Q5SW24 774 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
COPS7A-221ENST00000546229 PODNQ7Z5L7 613 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 BSDC1Q9NW68 430 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-221ENST00000546229 IL16Q14005 1332 aa16.19■□□□□ 0.18
COPS7A-221ENST00000546229 KLRK1P26718 216 aa16.18■□□□□ 0.18
COPS7A-221ENST00000546229 KIF23Q02241 960 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-221ENST00000546229 SCARF1Q14162 830 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms