RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SBF1O95248 1867 aa25.96■■□□□ 1.75
SCARB1-211ENST00000546215 PTPN12Q05209 780 aaKnown RBP25.95■■□□□ 1.75
SCARB1-211ENST00000546215 NSFL1CQ9UNZ2 370 aaKnown RBP25.95■■□□□ 1.75
SCARB1-211ENST00000546215 SRGAP3O43295 1099 aa25.95■■□□□ 1.74
SCARB1-211ENST00000546215 DPP8Q6V1X1 898 aaPredicted RBP25.95■■□□□ 1.74
SCARB1-211ENST00000546215 RTFDC1Q9BY42 306 aaPredicted RBP25.95■■□□□ 1.74
SCARB1-211ENST00000546215 PODXL2Q9NZ53 605 aa25.95■■□□□ 1.74
SCARB1-211ENST00000546215 PNMA6EA0A0J9YXQ4 647 aa25.94■■□□□ 1.74
SCARB1-211ENST00000546215 PUS3Q9BZE2 481 aaKnown RBP25.94■■□□□ 1.74
SCARB1-211ENST00000546215 CHD4Q14839 1912 aa25.93■■□□□ 1.74
SCARB1-211ENST00000546215 LTBP1Q14766 1721 aa25.93■■□□□ 1.74
SCARB1-211ENST00000546215 ATP8B2P98198 1209 aa25.93■■□□□ 1.74
SCARB1-211ENST00000546215 LMNB1P20700 586 aa25.92■■□□□ 1.74
SCARB1-211ENST00000546215 ZNF277Q9NRM2 450 aaPredicted RBP25.92■■□□□ 1.74
SCARB1-211ENST00000546215 CNNM1Q9NRU3 951 aa25.92■■□□□ 1.74
SCARB1-211ENST00000546215 ANKIB1Q9P2G1 1089 aa25.92■■□□□ 1.74
SCARB1-211ENST00000546215 RIPOR2Q9Y4F9 1068 aa25.92■■□□□ 1.74
SCARB1-211ENST00000546215 DUOX1Q9NRD9 1551 aa25.92■■□□□ 1.74
SCARB1-211ENST00000546215 CCDC88AQ3V6T2 1871 aa25.92■■□□□ 1.74
SCARB1-211ENST00000546215 CHRNDQ07001 517 aa25.91■■□□□ 1.74
SCARB1-211ENST00000546215 CEP85Q6P2H3 762 aa25.91■■□□□ 1.74
SCARB1-211ENST00000546215 CRBNQ96SW2 442 aa25.91■■□□□ 1.74
SCARB1-211ENST00000546215 POLLQ9UGP5 575 aa25.91■■□□□ 1.74
SCARB1-211ENST00000546215 XDHP47989 1333 aa25.91■■□□□ 1.74
SCARB1-211ENST00000546215 LRRC24Q50LG9 513 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 COPRSQ9NQ92 184 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 POLA2Q14181 598 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 C9orf131Q5VYM1 1079 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 TBC1D16Q8TBP0 767 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 SSH3Q8TE77 659 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 ANKRD2Q9GZV1 360 aa25.9■■□□□ 1.74
SCARB1-211ENST00000546215 PA2G4Q9UQ80 394 aaKnown RBP25.9■■□□□ 1.74
SCARB1-211ENST00000546215 SUPT20HQ8NEM7 779 aa25.89■■□□□ 1.73
SCARB1-211ENST00000546215 GGA1Q9UJY5 639 aa25.89■■□□□ 1.73
SCARB1-211ENST00000546215 WTIPA6NIX2 430 aaPredicted RBP25.88■■□□□ 1.73
SCARB1-211ENST00000546215 EYA2O00167 538 aa25.88■■□□□ 1.73
SCARB1-211ENST00000546215 IARSP41252 1262 aaKnown RBP25.88■■□□□ 1.73
SCARB1-211ENST00000546215 RNF181Q9P0P0 153 aa25.88■■□□□ 1.73
SCARB1-211ENST00000546215 FBXO3Q9UK99 471 aa25.88■■□□□ 1.73
SCARB1-211ENST00000546215 C6orf229H3BNL8 230 aa25.87■■□□□ 1.73
SCARB1-211ENST00000546215 ATP2B4P23634 1241 aa25.87■■□□□ 1.73
SCARB1-211ENST00000546215 ATG9AQ7Z3C6 839 aa25.87■■□□□ 1.73
SCARB1-211ENST00000546215 HELBQ8NG08 1087 aaPredicted RBP25.87■■□□□ 1.73
SCARB1-211ENST00000546215 VPS33BQ9H267 617 aa25.87■■□□□ 1.73
SCARB1-211ENST00000546215 TAF5LO75529 589 aa25.86■■□□□ 1.73
SCARB1-211ENST00000546215 UFL1O94874 794 aa25.86■■□□□ 1.73
SCARB1-211ENST00000546215 SIL1Q9H173 461 aa25.86■■□□□ 1.73
SCARB1-211ENST00000546215 A0A1B0GUL6 1792 aa25.86■■□□□ 1.73
SCARB1-211ENST00000546215 CIAO1O76071 339 aa25.86■■□□□ 1.73
SCARB1-211ENST00000546215 RPAP2Q8IXW5 612 aaPredicted RBP25.86■■□□□ 1.73
SCARB1-211ENST00000546215 LEMD3Q9Y2U8 911 aa25.86■■□□□ 1.73
SCARB1-211ENST00000546215 DICER1Q9UPY3 1922 aaKnown RBP25.85■■□□□ 1.73
SCARB1-211ENST00000546215 MROH5Q6ZUA9 1318 aa25.85■■□□□ 1.73
SCARB1-211ENST00000546215 SIRT2Q8IXJ6 389 aa25.85■■□□□ 1.73
SCARB1-211ENST00000546215 GPR101Q96P66 508 aaPredicted RBP25.85■■□□□ 1.73
SCARB1-211ENST00000546215 PPIP5K2O43314 1243 aa25.84■■□□□ 1.73
SCARB1-211ENST00000546215 KIAA2012Q0VF49 1180 aa25.84■■□□□ 1.73
SCARB1-211ENST00000546215 AOC3Q16853 763 aa25.84■■□□□ 1.73
SCARB1-211ENST00000546215 WASHC4Q2M389 1173 aa25.84■■□□□ 1.73
SCARB1-211ENST00000546215 SNAP23O00161 211 aa25.83■■□□□ 1.73
SCARB1-211ENST00000546215 METTL24Q5JXM2 366 aa25.83■■□□□ 1.73
SCARB1-211ENST00000546215 VGLL2Q8N8G2 317 aa25.83■■□□□ 1.73
SCARB1-211ENST00000546215 EYA3Q99504 573 aa25.83■■□□□ 1.73
SCARB1-211ENST00000546215 ZNF804BA4D1E1 1349 aa25.83■■□□□ 1.73
SCARB1-211ENST00000546215 COL4A5P29400 1685 aa25.83■■□□□ 1.72
SCARB1-211ENST00000546215 IL15P40933 162 aaPredicted RBP25.82■■□□□ 1.72
SCARB1-211ENST00000546215 LARGE2Q8N3Y3 721 aa25.82■■□□□ 1.72
SCARB1-211ENST00000546215 RIMBP2O15034 1052 aa25.81■■□□□ 1.72
SCARB1-211ENST00000546215 PDE8BO95263 885 aa25.81■■□□□ 1.72
SCARB1-211ENST00000546215 ZC3H12CQ9C0D7 883 aaKnown RBP25.81■■□□□ 1.72
SCARB1-211ENST00000546215 KCNJ4P48050 445 aa25.8■■□□□ 1.72
SCARB1-211ENST00000546215 EXOC6Q8TAG9 804 aa25.8■■□□□ 1.72
SCARB1-211ENST00000546215 NOP58Q9Y2X3 529 aaKnown RBP25.8■■□□□ 1.72
SCARB1-211ENST00000546215 CENPBP07199 599 aaPredicted RBP25.79■■□□□ 1.72
SCARB1-211ENST00000546215 UBE4AQ14139 1066 aa25.79■■□□□ 1.72
SCARB1-211ENST00000546215 JDP2Q8WYK2 163 aa25.79■■□□□ 1.72
SCARB1-211ENST00000546215 MED23Q9ULK4 1368 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 ZC3H4Q9UPT8 1303 aaKnown RBP25.78■■□□□ 1.72
SCARB1-211ENST00000546215 IRS2Q9Y4H2 1338 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 SURF6O75683 361 aaKnown RBP25.78■■□□□ 1.72
SCARB1-211ENST00000546215 KLRK1P26718 216 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 PCDHB15Q9Y5E8 787 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 TIAM2Q8IVF5 1701 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 HMMRO75330 724 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 IRX6P78412 446 aaPredicted RBP25.78■■□□□ 1.72
SCARB1-211ENST00000546215 G3BP1Q13283 466 aaKnown RBP eCLIP25.78■■□□□ 1.72
SCARB1-211ENST00000546215 C15orf52Q6ZUT6 534 aaKnown RBP25.78■■□□□ 1.72
SCARB1-211ENST00000546215 TXNRD3Q86VQ6 643 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 CEP126Q9P2H0 1117 aa25.78■■□□□ 1.72
SCARB1-211ENST00000546215 FZD9O00144 591 aa25.77■■□□□ 1.72
SCARB1-211ENST00000546215 AAMPQ13685 434 aa25.77■■□□□ 1.72
SCARB1-211ENST00000546215 NIM1KQ8IY84 436 aa25.77■■□□□ 1.72
SCARB1-211ENST00000546215 SASH1O94885 1247 aa25.75■■□□□ 1.71
SCARB1-211ENST00000546215 FGFR2P21802 821 aa25.75■■□□□ 1.71
SCARB1-211ENST00000546215 DOK7Q18PE1 504 aa25.75■■□□□ 1.71
SCARB1-211ENST00000546215 ZNRF3Q9ULT6 936 aa25.75■■□□□ 1.71
SCARB1-211ENST00000546215 TFCP2Q12800 502 aa25.74■■□□□ 1.71
SCARB1-211ENST00000546215 PUM3Q15397 648 aaKnown RBP25.74■■□□□ 1.71
SCARB1-211ENST00000546215 DBNDD1Q9H9R9 158 aa25.74■■□□□ 1.71
SCARB1-211ENST00000546215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms