RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
UBC-213ENST00000546120 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
UBC-213ENST00000546120 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
UBC-213ENST00000546120 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
UBC-213ENST00000546120 NAA15Q9BXJ9 866 aaKnown RBP11.78□□□□□ -0.52
UBC-213ENST00000546120 ADAMTSL3P82987 1691 aa11.78□□□□□ -0.52
UBC-213ENST00000546120 POGZQ7Z3K3 1410 aa11.77□□□□□ -0.52
UBC-213ENST00000546120 H3BQV1 296 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
UBC-213ENST00000546120 POLR3GO15318 223 aaPredicted RBP11.77□□□□□ -0.53
UBC-213ENST00000546120 NR1I2O75469 434 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
UBC-213ENST00000546120 ADRA2BP18089 450 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 PIP4K2BP78356 416 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 APOBRQ0VD83 1088 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 TTLL5Q6EMB2 1281 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
UBC-213ENST00000546120 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
UBC-213ENST00000546120 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 REXO1L1PQ8IX06 675 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 TRMT1Q9NXH9 659 aaKnown RBP11.77□□□□□ -0.53
UBC-213ENST00000546120 MYO1AQ9UBC5 1043 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 NPATQ14207 1427 aa11.77□□□□□ -0.53
UBC-213ENST00000546120 PTPRMP28827 1452 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 USP27XA6NNY8 438 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 EIF3CLB5ME19 914 aaKnown RBP11.76□□□□□ -0.53
UBC-213ENST00000546120 KIF3CO14782 793 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
UBC-213ENST00000546120 LMAN1P49257 510 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 ME3Q16798 604 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 MSANTD4Q8NCY6 345 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 NEK11Q8NG66 645 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 RUBCNQ92622 972 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 COG3Q96JB2 828 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 EIF3CQ99613 913 aaKnown RBP11.76□□□□□ -0.53
UBC-213ENST00000546120 MRFAP1Q9Y605 127 aa11.76□□□□□ -0.53
UBC-213ENST00000546120 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 CLSTN1O94985 981 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 HOXB7P09629 217 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 ERCC3P19447 782 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 RPS6KB1P23443 525 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 NLRP12P59046 1061 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 RESTQ13127 1097 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 MTX1Q13505 466 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 MLECQ14165 292 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 LONRF2Q1L5Z9 754 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 TMEM132EQ6IEE7 984 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 TRIM65Q6PJ69 517 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 CLASRPQ8N2M8 674 aaKnown RBP11.75□□□□□ -0.53
UBC-213ENST00000546120 ENGASEQ8NFI3 743 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 RPGRIP1Q96KN7 1286 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 HOOK1Q9UJC3 728 aaKnown RBP11.75□□□□□ -0.53
UBC-213ENST00000546120 EXOC6BQ9Y2D4 811 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
UBC-213ENST00000546120 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 APBB1O00213 710 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 YEATS4O95619 227 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
UBC-213ENST00000546120 KIF4BQ2VIQ3 1234 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 ANKRD20A12PQ8NF67 263 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
UBC-213ENST00000546120 SECISBP2LQ93073 1101 aaKnown RBP11.74□□□□□ -0.53
UBC-213ENST00000546120 PGBD1Q96JS3 809 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
UBC-213ENST00000546120 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 MLH3Q9UHC1 1453 aa11.74□□□□□ -0.53
UBC-213ENST00000546120 RIMS1Q86UR5 1692 aaKnown RBP11.74□□□□□ -0.53
UBC-213ENST00000546120 MAP2K2P36507 400 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 AARSP49588 968 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBC-213ENST00000546120 CRB1P82279 1406 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 WHAMMP3Q1A5X7 153 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 SDF4Q9BRK5 362 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 CARD6Q9BX69 1037 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 PARD6BQ9BYG5 372 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBC-213ENST00000546120 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
UBC-213ENST00000546120 NRKQ7Z2Y5 1582 aa11.72□□□□□ -0.53
UBC-213ENST00000546120 ST5P78524 1137 aa11.72□□□□□ -0.53
UBC-213ENST00000546120 SATB1Q01826 763 aa11.72□□□□□ -0.53
UBC-213ENST00000546120 DDR1Q08345 913 aa11.72□□□□□ -0.53
UBC-213ENST00000546120 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
UBC-213ENST00000546120 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms