RNA–Protein interactions for RNA: ENST00000546076.5

TSPAN11-204, Transcript of tetraspanin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN11, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-204ENST00000546076 TAF1P21675 1872 aa19.77■□□□□ 0.76
TSPAN11-204ENST00000546076 SF3B3Q15393 1217 aaKnown RBP19.77■□□□□ 0.76
TSPAN11-204ENST00000546076 C2orf69Q8N8R5 385 aa19.77■□□□□ 0.76
TSPAN11-204ENST00000546076 CHPF2Q9P2E5 772 aa19.77■□□□□ 0.76
TSPAN11-204ENST00000546076 ATP5J2-PTCD1G3V325 749 aa19.76■□□□□ 0.75
TSPAN11-204ENST00000546076 ECE2O60344 883 aa19.76■□□□□ 0.75
TSPAN11-204ENST00000546076 HOXB7P09629 217 aa19.76■□□□□ 0.75
TSPAN11-204ENST00000546076 KIF23Q02241 960 aaPredicted RBP19.76■□□□□ 0.75
TSPAN11-204ENST00000546076 PLBD2Q8NHP8 589 aa19.76■□□□□ 0.75
TSPAN11-204ENST00000546076 DCPSQ96C86 337 aaKnown RBP19.76■□□□□ 0.75
TSPAN11-204ENST00000546076 RTL9Q8NET4 1388 aa19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 RPS12P25398 132 aaKnown RBP19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 ZNF157P51786 506 aaPredicted RBP19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 RTL5Q5HYW3 569 aaPredicted RBP19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 ANKRD13DQ6ZTN6 518 aa19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 ISCA1Q9BUE6 129 aa19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 MBIPQ9NS73 344 aa19.75■□□□□ 0.75
TSPAN11-204ENST00000546076 WWC1Q8IX03 1113 aa19.74■□□□□ 0.75
TSPAN11-204ENST00000546076 CCDC102AQ96A19 550 aa19.74■□□□□ 0.75
TSPAN11-204ENST00000546076 TRPA1O75762 1119 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 HDGFL1Q5TGJ6 251 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 FAM9BQ8IZU0 186 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 TBC1D16Q8TBP0 767 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 EYA3Q99504 573 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 RNF186Q9NXI6 227 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 SAGE1Q9NXZ1 904 aa19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 ASTN2O75129 1339 aaPredicted RBP19.73■□□□□ 0.75
TSPAN11-204ENST00000546076 COL4A1P02462 1669 aa19.72■□□□□ 0.75
TSPAN11-204ENST00000546076 LRRC37AA6NMS7 1700 aa19.72■□□□□ 0.75
TSPAN11-204ENST00000546076 KIF4BQ2VIQ3 1234 aa19.72■□□□□ 0.75
TSPAN11-204ENST00000546076 IRS4O14654 1257 aaPredicted RBP19.71■□□□□ 0.75
TSPAN11-204ENST00000546076 VIL1P09327 827 aaKnown RBP19.71■□□□□ 0.75
TSPAN11-204ENST00000546076 RPS8P62241 208 aaKnown RBP19.71■□□□□ 0.75
TSPAN11-204ENST00000546076 GGA3Q9NZ52 723 aa19.71■□□□□ 0.75
TSPAN11-204ENST00000546076 IL16Q14005 1332 aa19.71■□□□□ 0.75
TSPAN11-204ENST00000546076 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 SULF1Q8IWU6 871 aa19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 CSRNP1Q96S65 589 aa19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 CHMP4AQ9BY43 222 aa19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 ZC3H12CQ9C0D7 883 aaKnown RBP19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 DBF4Q9UBU7 674 aaPredicted RBP19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 DDX60Q8IY21 1712 aaKnown RBP19.7■□□□□ 0.74
TSPAN11-204ENST00000546076 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
TSPAN11-204ENST00000546076 SLC10A3P09131 477 aa19.69■□□□□ 0.74
TSPAN11-204ENST00000546076 SOX10P56693 466 aa19.69■□□□□ 0.74
TSPAN11-204ENST00000546076 WDR63Q8IWG1 891 aa19.69■□□□□ 0.74
TSPAN11-204ENST00000546076 CDCA5Q96FF9 252 aa19.69■□□□□ 0.74
TSPAN11-204ENST00000546076 POLR2AP24928 1970 aaKnown RBP19.69■□□□□ 0.74
TSPAN11-204ENST00000546076 SEC31BQ9NQW1 1179 aa19.68■□□□□ 0.74
TSPAN11-204ENST00000546076 PODXL2Q9NZ53 605 aa19.68■□□□□ 0.74
TSPAN11-204ENST00000546076 G3V3G9 751 aa19.67■□□□□ 0.74
TSPAN11-204ENST00000546076 UFL1O94874 794 aa19.67■□□□□ 0.74
TSPAN11-204ENST00000546076 TRIM28Q13263 835 aaKnown RBP19.67■□□□□ 0.74
TSPAN11-204ENST00000546076 SCARF1Q14162 830 aa19.67■□□□□ 0.74
TSPAN11-204ENST00000546076 DCAF8Q5TAQ9 597 aa19.67■□□□□ 0.74
TSPAN11-204ENST00000546076 ANKIB1Q9P2G1 1089 aa19.67■□□□□ 0.74
TSPAN11-204ENST00000546076 ANGEL2Q5VTE6 544 aaKnown RBP19.66■□□□□ 0.74
TSPAN11-204ENST00000546076 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
TSPAN11-204ENST00000546076 GGA1Q9UJY5 639 aa19.66■□□□□ 0.74
TSPAN11-204ENST00000546076 ZNF280AP59817 542 aaPredicted RBP19.65■□□□□ 0.74
TSPAN11-204ENST00000546076 RSBN1LQ6PCB5 846 aaPredicted RBP19.65■□□□□ 0.74
TSPAN11-204ENST00000546076 ZBTB38Q8NAP3 1195 aaPredicted RBP19.65■□□□□ 0.74
TSPAN11-204ENST00000546076 RIC3Q7Z5B4 369 aa19.64■□□□□ 0.73
TSPAN11-204ENST00000546076 CTU1Q7Z7A3 348 aaKnown RBP19.64■□□□□ 0.73
TSPAN11-204ENST00000546076 RASAL3Q86YV0 1011 aa19.64■□□□□ 0.73
TSPAN11-204ENST00000546076 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
TSPAN11-204ENST00000546076 AGBL3Q8NEM8 1001 aa19.64■□□□□ 0.73
TSPAN11-204ENST00000546076 PCDH10Q9P2E7 1040 aa19.64■□□□□ 0.73
TSPAN11-204ENST00000546076 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
TSPAN11-204ENST00000546076 JARID2Q92833 1246 aaPredicted RBP19.63■□□□□ 0.73
TSPAN11-204ENST00000546076 SCAF8Q9UPN6 1271 aaKnown RBP19.63■□□□□ 0.73
TSPAN11-204ENST00000546076 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
TSPAN11-204ENST00000546076 TNRC18O15417 2968 aaPredicted RBP19.62■□□□□ 0.73
TSPAN11-204ENST00000546076 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
TSPAN11-204ENST00000546076 MOB2Q70IA6 237 aa19.62■□□□□ 0.73
TSPAN11-204ENST00000546076 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
TSPAN11-204ENST00000546076 CCDC85AQ96PX6 553 aaPredicted RBP19.62■□□□□ 0.73
TSPAN11-204ENST00000546076 PHAXQ9H814 394 aaKnown RBP19.62■□□□□ 0.73
TSPAN11-204ENST00000546076 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 CCDC152Q4G0S7 254 aa19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 GMLQ99445 158 aa19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 MYD88Q99836 296 aa19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 MYOZ2Q9NPC6 264 aa19.61■□□□□ 0.73
TSPAN11-204ENST00000546076 USP17L8P0C7I0 530 aa19.6■□□□□ 0.73
TSPAN11-204ENST00000546076 HSP90B1P14625 803 aaKnown RBP19.6■□□□□ 0.73
TSPAN11-204ENST00000546076 FKBP1BP68106 108 aa19.6■□□□□ 0.73
TSPAN11-204ENST00000546076 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
TSPAN11-204ENST00000546076 UBE2Q2LH0YL09 131 aa19.59■□□□□ 0.73
TSPAN11-204ENST00000546076 PDE8AO60658 829 aa19.59■□□□□ 0.73
TSPAN11-204ENST00000546076 PCCAP05165 728 aaPredicted RBP19.59■□□□□ 0.73
TSPAN11-204ENST00000546076 PRAMEF18Q5VWM3 479 aa19.59■□□□□ 0.73
TSPAN11-204ENST00000546076 TSPYL6Q8N831 410 aa19.59■□□□□ 0.73
TSPAN11-204ENST00000546076 ZNF609O15014 1411 aa19.59■□□□□ 0.73
TSPAN11-204ENST00000546076 USP17L3A6NCW0 530 aa19.58■□□□□ 0.72
TSPAN11-204ENST00000546076 USP17L4A6NCW7 530 aa19.58■□□□□ 0.72
TSPAN11-204ENST00000546076 WTIPA6NIX2 430 aaPredicted RBP19.58■□□□□ 0.72
TSPAN11-204ENST00000546076 USP17L1Q7RTZ2 530 aa19.58■□□□□ 0.72
TSPAN11-204ENST00000546076 ANKRD18AQ8IVF6 992 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms