RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
CIT-217ENST00000545913 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 TUBB4BP68371 445 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
CIT-217ENST00000545913 KLF18A0A0U1RQI7 1052 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 AKR1B10O60218 316 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
CIT-217ENST00000545913 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 C14orf93Q9H972 538 aaKnown RBP13.34□□□□□ -0.27
CIT-217ENST00000545913 SNRKQ9NRH2 765 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 PSMA7O14818 248 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 ACEP12821 1306 aa13.34□□□□□ -0.27
CIT-217ENST00000545913 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.27
CIT-217ENST00000545913 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.27
CIT-217ENST00000545913 CTAGE9A4FU28 777 aa13.33□□□□□ -0.27
CIT-217ENST00000545913 GNAT2P19087 354 aa13.33□□□□□ -0.27
CIT-217ENST00000545913 RHPN1Q8TCX5 695 aa13.33□□□□□ -0.27
CIT-217ENST00000545913 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.27
CIT-217ENST00000545913 CALML3P27482 149 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 ARFGAP3Q9NP61 516 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 NUP160Q12769 1436 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 SDSP20132 328 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 SPAG5Q96R06 1193 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
CIT-217ENST00000545913 PANK2Q9BZ23 570 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 GTPBP4Q9BZE4 634 aaKnown RBP13.33□□□□□ -0.28
CIT-217ENST00000545913 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
CIT-217ENST00000545913 KRT13P13646 458 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 ABCC1P33527 1531 aa13.33□□□□□ -0.28
CIT-217ENST00000545913 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 STMN4Q9H169 189 aaPredicted RBP13.32□□□□□ -0.28
CIT-217ENST00000545913 HCLS1P14317 486 aaPredicted RBP13.32□□□□□ -0.28
CIT-217ENST00000545913 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 TSHZ3Q63HK5 1081 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 SPATA24Q86W54 205 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 NSRP1Q9H0G5 558 aaKnown RBP13.32□□□□□ -0.28
CIT-217ENST00000545913 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
CIT-217ENST00000545913 SYCP2Q9BX26 1530 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 SLC4A8Q2Y0W8 1093 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 CYP7A1P22680 504 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 GIMAP6Q6P9H5 292 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 IMPG2Q9BZV3 1241 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
CIT-217ENST00000545913 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 TUBB4AP04350 444 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 CALM1P0DP23 149 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 CALM2P0DP24 149 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 CALM3P0DP25 149 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 MRPS27Q92552 414 aaKnown RBP13.31□□□□□ -0.28
CIT-217ENST00000545913 ZNF622Q969S3 477 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■■■□□ 14.7
CIT-217ENST00000545913 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
CIT-217ENST00000545913 RRAGBQ5VZM2 374 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 AFMP43652 599 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 ANKS4BQ8N8V4 417 aa13.31□□□□□ -0.28
CIT-217ENST00000545913 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
CIT-217ENST00000545913 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
CIT-217ENST00000545913 BICDL2A1A5D9 508 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 PBRM1Q86U86 1689 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 SPDYE3A6NKU9 549 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 B4DLN1 442 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
CIT-217ENST00000545913 NAA16Q6N069 864 aaPredicted RBP13.3□□□□□ -0.28
CIT-217ENST00000545913 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
CIT-217ENST00000545913 Q6ZUG5 572 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 TRMT1LQ7Z2T5 733 aaKnown RBP13.3□□□□□ -0.28
CIT-217ENST00000545913 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 HDAC9Q9UKV0 1011 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 TNRQ92752 1358 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 PDE1AP54750 535 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 BRF1Q92994 677 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 PHACTR2O75167 634 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 PLCG2P16885 1265 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 LMBR1Q8WVP7 490 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
CIT-217ENST00000545913 ZFYVE9O95405 1425 aa13.29□□□□□ -0.28
CIT-217ENST00000545913 SRRTQ9BXP5 876 aaKnown RBP13.29□□□□□ -0.28
CIT-217ENST00000545913 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
CIT-217ENST00000545913 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
CIT-217ENST00000545913 NAPAP54920 295 aa13.29□□□□□ -0.28
CIT-217ENST00000545913 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
CIT-217ENST00000545913 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
CIT-217ENST00000545913 ALDH1L1O75891 902 aa13.29□□□□□ -0.28
CIT-217ENST00000545913 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
CIT-217ENST00000545913 ATP2A1O14983 1001 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms