RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 H7C1D1 291 aa25.38■■□□□ 1.65
CHD4-213ENST00000545584 DOK7Q18PE1 504 aa25.38■■□□□ 1.65
CHD4-213ENST00000545584 UBE3BQ7Z3V4 1068 aa25.38■■□□□ 1.65
CHD4-213ENST00000545584 H7C1W4 665 aa25.37■■□□□ 1.65
CHD4-213ENST00000545584 ECE2O60344 883 aa25.37■■□□□ 1.65
CHD4-213ENST00000545584 HSPA1AP0DMV8 641 aaKnown RBP25.37■■□□□ 1.65
CHD4-213ENST00000545584 HSPA1BP0DMV9 641 aaKnown RBP25.37■■□□□ 1.65
CHD4-213ENST00000545584 TTLL11Q8NHH1 800 aa25.37■■□□□ 1.65
CHD4-213ENST00000545584 CNOT7Q9UIV1 285 aaKnown RBP25.37■■□□□ 1.65
CHD4-213ENST00000545584 PSMD14O00487 310 aa25.36■■□□□ 1.65
CHD4-213ENST00000545584 GCKRQ14397 625 aa25.36■■□□□ 1.65
CHD4-213ENST00000545584 LINS1Q8NG48 757 aa25.36■■□□□ 1.65
CHD4-213ENST00000545584 DPF2Q92785 391 aa25.36■■□□□ 1.65
CHD4-213ENST00000545584 GPR101Q96P66 508 aaPredicted RBP25.36■■□□□ 1.65
CHD4-213ENST00000545584 XDHP47989 1333 aa25.36■■□□□ 1.65
CHD4-213ENST00000545584 GREM2Q9H772 168 aa25.35■■□□□ 1.65
CHD4-213ENST00000545584 SPINK5Q9NQ38 1064 aaPredicted RBP25.35■■□□□ 1.65
CHD4-213ENST00000545584 ABT1Q9ULW3 272 aaKnown RBP25.35■■□□□ 1.65
CHD4-213ENST00000545584 MYH3P11055 1940 aa25.34■■□□□ 1.65
CHD4-213ENST00000545584 MICALL2Q8IY33 904 aa25.34■■□□□ 1.65
CHD4-213ENST00000545584 ZC3H15Q8WU90 426 aaKnown RBP25.34■■□□□ 1.65
CHD4-213ENST00000545584 ZBTB12Q9Y330 459 aaPredicted RBP25.34■■□□□ 1.65
CHD4-213ENST00000545584 RTL9Q8NET4 1388 aa25.33■■□□□ 1.65
CHD4-213ENST00000545584 ATP2B4P23634 1241 aa25.33■■□□□ 1.65
CHD4-213ENST00000545584 RPS12P25398 132 aaKnown RBP25.33■■□□□ 1.65
CHD4-213ENST00000545584 DEFB115Q30KQ5 88 aa25.33■■□□□ 1.65
CHD4-213ENST00000545584 PLA2G12BQ9BX93 195 aa25.32■■□□□ 1.64
CHD4-213ENST00000545584 BSDC1Q9NW68 430 aaPredicted RBP25.32■■□□□ 1.64
CHD4-213ENST00000545584 RASSF10A6NK89 507 aa25.31■■□□□ 1.64
CHD4-213ENST00000545584 IGHMBP2P38935 993 aaKnown RBP25.31■■□□□ 1.64
CHD4-213ENST00000545584 VEGFBP49765 207 aa25.31■■□□□ 1.64
CHD4-213ENST00000545584 PGAP2Q9UHJ9 254 aa25.31■■□□□ 1.64
CHD4-213ENST00000545584 TRAF5O00463 557 aa25.3■■□□□ 1.64
CHD4-213ENST00000545584 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
CHD4-213ENST00000545584 KCNQ5Q9NR82 932 aa25.3■■□□□ 1.64
CHD4-213ENST00000545584 SHTN1A0MZ66 631 aa25.29■■□□□ 1.64
CHD4-213ENST00000545584 HIRAP54198 1017 aaPredicted RBP25.29■■□□□ 1.64
CHD4-213ENST00000545584 FMR1Q06787 632 aaKnown RBP eCLIP25.29■■□□□ 1.644e-14■■■■□ 23.1
CHD4-213ENST00000545584 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
CHD4-213ENST00000545584 F6X3S4 739 aa25.28■■□□□ 1.64
CHD4-213ENST00000545584 VIL1P09327 827 aaKnown RBP25.28■■□□□ 1.64
CHD4-213ENST00000545584 CASP7P55210 303 aa25.28■■□□□ 1.64
CHD4-213ENST00000545584 CDC37L1Q7L3B6 337 aa25.28■■□□□ 1.64
CHD4-213ENST00000545584 GLIS2Q9BZE0 524 aaPredicted RBP25.28■■□□□ 1.64
CHD4-213ENST00000545584 TRPM7Q96QT4 1865 aa25.28■■□□□ 1.64
CHD4-213ENST00000545584 ITGA6P23229 1130 aa25.27■■□□□ 1.64
CHD4-213ENST00000545584 SAMD7Q7Z3H4 446 aa25.27■■□□□ 1.64
CHD4-213ENST00000545584 MPHOSPH8Q99549 860 aa25.27■■□□□ 1.64
CHD4-213ENST00000545584 CSF1RP07333 972 aa25.26■■□□□ 1.63
CHD4-213ENST00000545584 FAM161AQ3B820 660 aa25.26■■□□□ 1.63
CHD4-213ENST00000545584 TBC1D10BQ4KMP7 808 aaPredicted RBP25.26■■□□□ 1.63
CHD4-213ENST00000545584 COL13A1Q5TAT6 717 aaPredicted RBP25.26■■□□□ 1.63
CHD4-213ENST00000545584 CST9Q5W186 159 aa25.26■■□□□ 1.63
CHD4-213ENST00000545584 PAXIP1Q6ZW49 1069 aaPredicted RBP25.26■■□□□ 1.63
CHD4-213ENST00000545584 PODNQ7Z5L7 613 aa25.26■■□□□ 1.63
CHD4-213ENST00000545584 AIDAQ96BJ3 306 aa25.26■■□□□ 1.63
CHD4-213ENST00000545584 CELF2O95319 508 aaKnown RBP25.25■■□□□ 1.63
CHD4-213ENST00000545584 ECE1P42892 770 aa25.25■■□□□ 1.63
CHD4-213ENST00000545584 CCT4P50991 539 aaKnown RBP25.25■■□□□ 1.63
CHD4-213ENST00000545584 BEND3Q5T5X7 828 aa25.25■■□□□ 1.63
CHD4-213ENST00000545584 RBM26Q5T8P6 1007 aaKnown RBP25.25■■□□□ 1.63
CHD4-213ENST00000545584 ZNF521Q96K83 1311 aa25.25■■□□□ 1.63
CHD4-213ENST00000545584 WDR33Q9C0J8 1336 aaKnown RBP25.25■■□□□ 1.63
CHD4-213ENST00000545584 SPEF2Q9C093 1822 aa25.24■■□□□ 1.63
CHD4-213ENST00000545584 MED23Q9ULK4 1368 aa25.24■■□□□ 1.63
CHD4-213ENST00000545584 ANKRD18BA2A2Z9 1011 aa25.24■■□□□ 1.63
CHD4-213ENST00000545584 ANKRD2Q9GZV1 360 aa25.24■■□□□ 1.63
CHD4-213ENST00000545584 LEMD3Q9Y2U8 911 aa25.24■■□□□ 1.63
CHD4-213ENST00000545584 PCNTO95613 3336 aa25.24■■□□□ 1.63
CHD4-213ENST00000545584 RSBN1LQ6PCB5 846 aaPredicted RBP25.23■■□□□ 1.63
CHD4-213ENST00000545584 AGBL3Q8NEM8 1001 aa25.23■■□□□ 1.63
CHD4-213ENST00000545584 ZNF408Q9H9D4 720 aa25.23■■□□□ 1.63
CHD4-213ENST00000545584 TLL2Q9Y6L7 1015 aa25.23■■□□□ 1.63
CHD4-213ENST00000545584 SCN9AQ15858 1988 aa25.23■■□□□ 1.63
CHD4-213ENST00000545584 USP17L3A6NCW0 530 aa25.22■■□□□ 1.63
CHD4-213ENST00000545584 USP17L4A6NCW7 530 aa25.22■■□□□ 1.63
CHD4-213ENST00000545584 KIF4BQ2VIQ3 1234 aa25.22■■□□□ 1.63
CHD4-213ENST00000545584 USP17L1Q7RTZ2 530 aa25.22■■□□□ 1.63
CHD4-213ENST00000545584 DCPSQ96C86 337 aaKnown RBP25.22■■□□□ 1.63
CHD4-213ENST00000545584 CHMP3Q9Y3E7 222 aa25.22■■□□□ 1.63
CHD4-213ENST00000545584 E9PSI1 815 aa25.21■■□□□ 1.63
CHD4-213ENST00000545584 SLC4A10Q6U841 1118 aa25.21■■□□□ 1.63
CHD4-213ENST00000545584 USP48Q86UV5 1035 aa25.21■■□□□ 1.63
CHD4-213ENST00000545584 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
CHD4-213ENST00000545584 C9orf78Q9NZ63 289 aaPredicted RBP25.21■■□□□ 1.63
CHD4-213ENST00000545584 GRM8O00222 908 aa25.2■■□□□ 1.62
CHD4-213ENST00000545584 ALDH1L1O75891 902 aa25.2■■□□□ 1.62
CHD4-213ENST00000545584 KCNJ4P48050 445 aa25.2■■□□□ 1.62
CHD4-213ENST00000545584 IFIT5Q13325 482 aaKnown RBP25.2■■□□□ 1.62
CHD4-213ENST00000545584 KRT26Q7Z3Y9 468 aa25.2■■□□□ 1.62
CHD4-213ENST00000545584 ZNF804BA4D1E1 1349 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 EGFRP00533 1210 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 MAP2K1Q02750 393 aaPredicted RBP25.19■■□□□ 1.62
CHD4-213ENST00000545584 GRM1Q13255 1194 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 TNS4Q8IZW8 715 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 SRCIN1Q9C0H9 1055 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 COA1Q9GZY4 146 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 ZNF609O15014 1411 aa25.19■■□□□ 1.62
CHD4-213ENST00000545584 WTIPA6NIX2 430 aaPredicted RBP25.18■■□□□ 1.62
CHD4-213ENST00000545584 FOXN1O15353 648 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms