RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 EYA3Q99504 573 aa27.05■■□□□ 1.92
SCARB1-210ENST00000545493 UFL1O94874 794 aa27.04■■□□□ 1.92
SCARB1-210ENST00000545493 FMR1Q06787 632 aaKnown RBP eCLIP27.04■■□□□ 1.92
SCARB1-210ENST00000545493 IFFO2Q5TF58 517 aa27.04■■□□□ 1.92
SCARB1-210ENST00000545493 TRPM4Q8TD43 1214 aa27.04■■□□□ 1.92
SCARB1-210ENST00000545493 BCL2L13Q9BXK5 485 aa27.04■■□□□ 1.92
SCARB1-210ENST00000545493 PSMD14O00487 310 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 UBE3BQ7Z3V4 1068 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 TTLL11Q8NHH1 800 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 DNAAF4Q8WXU2 420 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 ZNF521Q96K83 1311 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 THSD7BQ9C0I4 1608 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 GREM2Q9H772 168 aa27.03■■□□□ 1.92
SCARB1-210ENST00000545493 ZBTB12Q9Y330 459 aaPredicted RBP27.03■■□□□ 1.92
SCARB1-210ENST00000545493 H7C1W4 665 aa27.02■■□□□ 1.92
SCARB1-210ENST00000545493 CASP7P55210 303 aa27.02■■□□□ 1.92
SCARB1-210ENST00000545493 GCKRQ14397 625 aa27.02■■□□□ 1.92
SCARB1-210ENST00000545493 DOK7Q18PE1 504 aa27.02■■□□□ 1.92
SCARB1-210ENST00000545493 ANKRD18AQ8IVF6 992 aa27.02■■□□□ 1.92
SCARB1-210ENST00000545493 GGA1Q9UJY5 639 aa27.02■■□□□ 1.92
SCARB1-210ENST00000545493 TRAF5O00463 557 aa27.01■■□□□ 1.91
SCARB1-210ENST00000545493 KCNQ5Q9NR82 932 aa27.01■■□□□ 1.91
SCARB1-210ENST00000545493 ANKIB1Q9P2G1 1089 aa27.01■■□□□ 1.91
SCARB1-210ENST00000545493 ZNF646O15015 1829 aaPredicted RBP27.01■■□□□ 1.91
SCARB1-210ENST00000545493 XDHP47989 1333 aa27■■□□□ 1.91
SCARB1-210ENST00000545493 HIRAP54198 1017 aaPredicted RBP27■■□□□ 1.91
SCARB1-210ENST00000545493 MICALL2Q8IY33 904 aa27■■□□□ 1.91
SCARB1-210ENST00000545493 CDC5LQ99459 802 aaKnown RBP27■■□□□ 1.91
SCARB1-210ENST00000545493 RASSF10A6NK89 507 aa26.99■■□□□ 1.91
SCARB1-210ENST00000545493 PLA2G12BQ9BX93 195 aa26.99■■□□□ 1.91
SCARB1-210ENST00000545493 MYH16Q9H6N6 1097 aa26.99■■□□□ 1.91
SCARB1-210ENST00000545493 CNOT7Q9UIV1 285 aaKnown RBP26.99■■□□□ 1.91
SCARB1-210ENST00000545493 A0A1B0GUL6 1792 aa26.99■■□□□ 1.91
SCARB1-210ENST00000545493 VEGFBP49765 207 aa26.98■■□□□ 1.91
SCARB1-210ENST00000545493 LINS1Q8NG48 757 aa26.98■■□□□ 1.91
SCARB1-210ENST00000545493 ZNF609O15014 1411 aa26.98■■□□□ 1.91
SCARB1-210ENST00000545493 DPF2Q92785 391 aa26.97■■□□□ 1.91
SCARB1-210ENST00000545493 ZC3H12CQ9C0D7 883 aaKnown RBP26.97■■□□□ 1.91
SCARB1-210ENST00000545493 PGAP2Q9UHJ9 254 aa26.97■■□□□ 1.91
SCARB1-210ENST00000545493 F6X3S4 739 aa26.96■■□□□ 1.91
SCARB1-210ENST00000545493 FAM161AQ3B820 660 aa26.96■■□□□ 1.91
SCARB1-210ENST00000545493 COL13A1Q5TAT6 717 aaPredicted RBP26.96■■□□□ 1.91
SCARB1-210ENST00000545493 EGFRP00533 1210 aa26.95■■□□□ 1.9
SCARB1-210ENST00000545493 GLIS2Q9BZE0 524 aaPredicted RBP26.95■■□□□ 1.9
SCARB1-210ENST00000545493 BSDC1Q9NW68 430 aaPredicted RBP26.95■■□□□ 1.9
SCARB1-210ENST00000545493 ABT1Q9ULW3 272 aaKnown RBP26.95■■□□□ 1.9
SCARB1-210ENST00000545493 MED23Q9ULK4 1368 aa26.95■■□□□ 1.9
SCARB1-210ENST00000545493 WTIPA6NIX2 430 aaPredicted RBP26.94■■□□□ 1.9
SCARB1-210ENST00000545493 RPS12P25398 132 aaKnown RBP26.94■■□□□ 1.9
SCARB1-210ENST00000545493 CST9Q5W186 159 aa26.94■■□□□ 1.9
SCARB1-210ENST00000545493 H7C1D1 291 aa26.93■■□□□ 1.9
SCARB1-210ENST00000545493 ATP2B4P23634 1241 aa26.93■■□□□ 1.9
SCARB1-210ENST00000545493 BEND3Q5T5X7 828 aa26.93■■□□□ 1.9
SCARB1-210ENST00000545493 SAMD7Q7Z3H4 446 aa26.93■■□□□ 1.9
SCARB1-210ENST00000545493 ZC3H15Q8WU90 426 aaKnown RBP26.93■■□□□ 1.9
SCARB1-210ENST00000545493 MINPP1Q9UNW1 487 aa26.93■■□□□ 1.9
SCARB1-210ENST00000545493 VIL1P09327 827 aaKnown RBP26.92■■□□□ 1.9
SCARB1-210ENST00000545493 ITGA6P23229 1130 aa26.92■■□□□ 1.9
SCARB1-210ENST00000545493 CSF1RP07333 972 aa26.91■■□□□ 1.9
SCARB1-210ENST00000545493 DEFB115Q30KQ5 88 aa26.91■■□□□ 1.9
SCARB1-210ENST00000545493 TBC1D10BQ4KMP7 808 aaPredicted RBP26.91■■□□□ 1.9
SCARB1-210ENST00000545493 IGHMBP2P38935 993 aaKnown RBP26.89■■□□□ 1.9
SCARB1-210ENST00000545493 CCT4P50991 539 aaKnown RBP26.89■■□□□ 1.9
SCARB1-210ENST00000545493 TLL2Q9Y6L7 1015 aa26.89■■□□□ 1.9
SCARB1-210ENST00000545493 CELF2O95319 508 aaKnown RBP26.88■■□□□ 1.89
SCARB1-210ENST00000545493 WDR33Q9C0J8 1336 aaKnown RBP26.88■■□□□ 1.89
SCARB1-210ENST00000545493 G3V3G9 751 aa26.87■■□□□ 1.89
SCARB1-210ENST00000545493 DCAF8Q5TAQ9 597 aa26.87■■□□□ 1.89
SCARB1-210ENST00000545493 RSBN1LQ6PCB5 846 aaPredicted RBP26.87■■□□□ 1.89
SCARB1-210ENST00000545493 FOXN1O15353 648 aa26.86■■□□□ 1.89
SCARB1-210ENST00000545493 FOXO4P98177 505 aa26.86■■□□□ 1.89
SCARB1-210ENST00000545493 KIF4BQ2VIQ3 1234 aa26.86■■□□□ 1.89
SCARB1-210ENST00000545493 CDC37L1Q7L3B6 337 aa26.86■■□□□ 1.89
SCARB1-210ENST00000545493 KLRK1P26718 216 aa26.85■■□□□ 1.89
SCARB1-210ENST00000545493 DLK2Q6UY11 383 aa26.85■■□□□ 1.89
SCARB1-210ENST00000545493 PODNQ7Z5L7 613 aa26.85■■□□□ 1.89
SCARB1-210ENST00000545493 POLR2AP24928 1970 aaKnown RBP26.84■■□□□ 1.89
SCARB1-210ENST00000545493 ZNF280AP59817 542 aaPredicted RBP26.84■■□□□ 1.89
SCARB1-210ENST00000545493 EPHA10Q5JZY3 1008 aa26.84■■□□□ 1.89
SCARB1-210ENST00000545493 RBM26Q5T8P6 1007 aaKnown RBP26.84■■□□□ 1.89
SCARB1-210ENST00000545493 CYP4F22Q6NT55 531 aa26.84■■□□□ 1.89
SCARB1-210ENST00000545493 TXNRD3Q86VQ6 643 aa26.84■■□□□ 1.89
SCARB1-210ENST00000545493 AGBL3Q8NEM8 1001 aa26.84■■□□□ 1.89
SCARB1-210ENST00000545493 CAPNS2Q96L46 248 aa26.84■■□□□ 1.89
SCARB1-210ENST00000545493 GMLQ99445 158 aa26.84■■□□□ 1.89
SCARB1-210ENST00000545493 GRM8O00222 908 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 PAXIP1Q6ZW49 1069 aaPredicted RBP26.83■■□□□ 1.89
SCARB1-210ENST00000545493 SAPCD2Q86UD0 394 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 USP48Q86UV5 1035 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 MPHOSPH8Q99549 860 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 ZNF408Q9H9D4 720 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 WBP1LQ9NX94 342 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 LEMD3Q9Y2U8 911 aa26.83■■□□□ 1.89
SCARB1-210ENST00000545493 ASTN2O75129 1339 aaPredicted RBP26.83■■□□□ 1.89
SCARB1-210ENST00000545493 ANKRD18BA2A2Z9 1011 aa26.82■■□□□ 1.88
SCARB1-210ENST00000545493 ADM5C9JUS6 153 aa26.82■■□□□ 1.88
SCARB1-210ENST00000545493 CHRNDQ07001 517 aa26.82■■□□□ 1.88
SCARB1-210ENST00000545493 GGA3Q9NZ52 723 aa26.82■■□□□ 1.88
SCARB1-210ENST00000545493 ZNF804BA4D1E1 1349 aa26.82■■□□□ 1.88
SCARB1-210ENST00000545493 USP17L3A6NCW0 530 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms