RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 BCL11BQ9C0K0 894 aaPredicted RBP27.61■■■□□ 2.01
FOXA1-202ENST00000545425 RRP9O43818 475 aaKnown RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 CPA1P15085 419 aa27.6■■■□□ 2.01
FOXA1-202ENST00000545425 SCAND2PQ9GZW5 306 aaPredicted RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 SIL1Q9H173 461 aa27.6■■■□□ 2.01
FOXA1-202ENST00000545425 TLR7Q9NYK1 1049 aaKnown RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 HMGB1P09429 215 aaKnown RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 CABP4P57796 275 aa27.6■■■□□ 2.01
FOXA1-202ENST00000545425 EZH2Q15910 746 aaKnown RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 TNS1Q9HBL0 1735 aaKnown RBP27.6■■■□□ 2.01
FOXA1-202ENST00000545425 ST3GAL1Q11201 340 aa27.59■■■□□ 2.01
FOXA1-202ENST00000545425 EPHA10Q5JZY3 1008 aa27.59■■■□□ 2.01
FOXA1-202ENST00000545425 RNF214Q8ND24 703 aa27.59■■■□□ 2.01
FOXA1-202ENST00000545425 SPEF2Q9C093 1822 aa27.59■■■□□ 2.01
FOXA1-202ENST00000545425 SH3TC1Q8TE82 1336 aa27.58■■■□□ 2.01
FOXA1-202ENST00000545425 FIBPO43427 364 aa27.58■■■□□ 2.01
FOXA1-202ENST00000545425 CASP7P55210 303 aa27.58■■■□□ 2.01
FOXA1-202ENST00000545425 DBNLQ9UJU6 430 aaKnown RBP27.58■■■□□ 2.01
FOXA1-202ENST00000545425 PALLDQ8WX93 1383 aa27.58■■■□□ 2.01
FOXA1-202ENST00000545425 CYP27B1O15528 508 aa27.57■■■□□ 2
FOXA1-202ENST00000545425 TPM3P06753 285 aa27.57■■■□□ 2
FOXA1-202ENST00000545425 ATG3Q9NT62 314 aa27.57■■■□□ 2
FOXA1-202ENST00000545425 USP16Q9Y5T5 823 aa27.57■■■□□ 2
FOXA1-202ENST00000545425 PTMAP06454 111 aaKnown RBP27.57■■■□□ 2
FOXA1-202ENST00000545425 FUCA2Q9BTY2 467 aa27.57■■■□□ 2
FOXA1-202ENST00000545425 VPS37CA5D8V6 355 aaPredicted RBP27.56■■■□□ 2
FOXA1-202ENST00000545425 DNM1Q05193 864 aaKnown RBP27.56■■■□□ 2
FOXA1-202ENST00000545425 MCMDC2Q4G0Z9 681 aa27.56■■■□□ 2
FOXA1-202ENST00000545425 UBR2Q8IWV8 1755 aa27.56■■■□□ 2
FOXA1-202ENST00000545425 A0A087WZG4 1122 aa27.55■■■□□ 2
FOXA1-202ENST00000545425 H7C1W4 665 aa27.55■■■□□ 2
FOXA1-202ENST00000545425 FOXD4L6Q3SYB3 417 aaPredicted RBP27.55■■■□□ 2
FOXA1-202ENST00000545425 FOXD4L3Q6VB84 417 aaPredicted RBP27.55■■■□□ 2
FOXA1-202ENST00000545425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.55■■■□□ 2
FOXA1-202ENST00000545425 ERVV-2B6SEH9 535 aa27.55■■■□□ 2
FOXA1-202ENST00000545425 PLSCR1O15162 318 aa27.55■■■□□ 2
FOXA1-202ENST00000545425 TFCP2Q12800 502 aa27.55■■■□□ 2
FOXA1-202ENST00000545425 LLPHQ9BRT6 129 aaKnown RBP27.55■■■□□ 2
FOXA1-202ENST00000545425 HELLSQ9NRZ9 838 aa27.55■■■□□ 2
FOXA1-202ENST00000545425 PCDH11XQ9BZA7 1347 aa27.54■■■□□ 2
FOXA1-202ENST00000545425 PCDH11YQ9BZA8 1340 aa27.54■■■□□ 2
FOXA1-202ENST00000545425 TOB2Q14106 344 aaPredicted RBP27.54■■■□□ 2
FOXA1-202ENST00000545425 UBE3BQ7Z3V4 1068 aa27.54■■■□□ 2
FOXA1-202ENST00000545425 NEK1Q96PY6 1258 aa27.54■■■□□ 2
FOXA1-202ENST00000545425 CCDC192P0DO97 292 aa27.53■■■□□ 2
FOXA1-202ENST00000545425 KBTBD3Q8NAB2 608 aa27.53■■■□□ 2
FOXA1-202ENST00000545425 ZCRB1Q8TBF4 217 aaKnown RBP27.53■■■□□ 2
FOXA1-202ENST00000545425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.53■■■□□ 2
FOXA1-202ENST00000545425 NUP188Q5SRE5 1749 aa27.53■■■□□ 2
FOXA1-202ENST00000545425 KIAA2012Q0VF49 1180 aa27.53■■■□□ 2
FOXA1-202ENST00000545425 DDX54Q8TDD1 881 aaKnown RBP27.53■■■□□ 2
FOXA1-202ENST00000545425 LARP6Q9BRS8 491 aaKnown RBP27.53■■■□□ 2
FOXA1-202ENST00000545425 FBXO3Q9UK99 471 aa27.53■■■□□ 2
FOXA1-202ENST00000545425 KIF3AQ9Y496 699 aa27.53■■■□□ 2
FOXA1-202ENST00000545425 PAPPAQ13219 1627 aa27.52■■■□□ 2
FOXA1-202ENST00000545425 IL15P40933 162 aaPredicted RBP27.52■■■□□ 2
FOXA1-202ENST00000545425 ZNF589Q86UQ0 364 aaPredicted RBP27.52■■■□□ 2
FOXA1-202ENST00000545425 KDM4AO75164 1064 aa27.51■■□□□ 1.99
FOXA1-202ENST00000545425 CIAO1O76071 339 aa27.51■■□□□ 1.99
FOXA1-202ENST00000545425 LRRFIP1Q32MZ4 808 aaKnown RBP27.51■■□□□ 1.99
FOXA1-202ENST00000545425 NECAB1Q8N987 351 aa27.51■■□□□ 1.99
FOXA1-202ENST00000545425 GTF3C6Q969F1 213 aa27.51■■□□□ 1.99
FOXA1-202ENST00000545425 DSCC1Q9BVC3 393 aa27.51■■□□□ 1.99
FOXA1-202ENST00000545425 ZSCAN16Q9H4T2 348 aaPredicted RBP27.51■■□□□ 1.99
FOXA1-202ENST00000545425 DDX19AQ9NUU7 478 aaKnown RBP27.51■■□□□ 1.99
FOXA1-202ENST00000545425 CWC25Q9NXE8 425 aaPredicted RBP27.51■■□□□ 1.99
FOXA1-202ENST00000545425 KLHDC4Q8TBB5 520 aa27.51■■□□□ 1.99
FOXA1-202ENST00000545425 NKX1-1Q15270 411 aaPredicted RBP27.5■■□□□ 1.99
FOXA1-202ENST00000545425 CCDC191Q8NCU4 936 aa27.5■■□□□ 1.99
FOXA1-202ENST00000545425 ZNF609O15014 1411 aa27.49■■□□□ 1.99
FOXA1-202ENST00000545425 PTF1AQ7RTS3 328 aa27.49■■□□□ 1.99
FOXA1-202ENST00000545425 CAVIN2O95810 425 aa27.48■■□□□ 1.99
FOXA1-202ENST00000545425 USP25Q9UHP3 1055 aa27.48■■□□□ 1.99
FOXA1-202ENST00000545425 FOXO4P98177 505 aa27.48■■□□□ 1.99
FOXA1-202ENST00000545425 ATL3Q6DD88 541 aa27.48■■□□□ 1.99
FOXA1-202ENST00000545425 MAP3K11Q16584 847 aa27.47■■□□□ 1.99
FOXA1-202ENST00000545425 DBNDD2Q9BQY9 259 aa27.47■■□□□ 1.99
FOXA1-202ENST00000545425 KCNQ2O43526 872 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 HCLS1P14317 486 aaPredicted RBP27.46■■□□□ 1.99
FOXA1-202ENST00000545425 HMGN5P82970 282 aaKnown RBP27.46■■□□□ 1.99
FOXA1-202ENST00000545425 NBPF14Q5TI25 921 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 LMBR1LQ6UX01 489 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 CDC37L1Q7L3B6 337 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 TTC6Q86TZ1 520 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 ACSBG1Q96GR2 724 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 NUP62CLQ9H1M0 184 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 SBF2Q86WG5 1849 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 GOLGA6L4A6NEF3 574 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 ADCY5O95622 1261 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 TJP1Q07157 1748 aa27.46■■□□□ 1.99
FOXA1-202ENST00000545425 GOLGA6L6A8MZA4 724 aa27.45■■□□□ 1.98
FOXA1-202ENST00000545425 CFAP45Q9UL16 551 aa27.45■■□□□ 1.98
FOXA1-202ENST00000545425 RBM43Q6ZSC3 357 aaKnown RBP27.44■■□□□ 1.98
FOXA1-202ENST00000545425 SPATA32Q96LK8 384 aa27.44■■□□□ 1.98
FOXA1-202ENST00000545425 MAP7D2Q96T17 732 aa27.44■■□□□ 1.98
FOXA1-202ENST00000545425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.44■■□□□ 1.98
FOXA1-202ENST00000545425 ABCC12Q96J65 1359 aa27.44■■□□□ 1.98
FOXA1-202ENST00000545425 KCPQ6ZWJ8 1503 aa27.44■■□□□ 1.98
FOXA1-202ENST00000545425 HSP90AA2PQ14568 343 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms