RNA–Protein interactions for RNA: ENST00000545419.5

RNF10-223, Transcript of ring finger protein 10, human

TSL 5

Gene RNF10, Length 1,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-223	ENST00000545419	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	CDHR5	Q9HBB8	845 aa		10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	RNF123	Q5XPI4	1314 aa		10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	UBN2	Q6ZU65	1347 aa		10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	FANCI	Q9NVI1	1328 aa		10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	AFDN	P55196	1824 aa	Known RBP	10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	LAMB4	A4D0S4	1761 aa		10.11	□□□□□ -0.79
RNF10-223	ENST00000545419	FAM177B	A6PVY3	158 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419		E9PSI1	815 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	DDX58	O95786	925 aa	Known RBP	10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	RIC3	Q7Z5B4	369 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	NUTM1	Q86Y26	1132 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	NLRP3	Q96P20	1036 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	STK31	Q9BXU1	1019 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	WWC3	Q9ULE0	1092 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	UTRN	P46939	3433 aa		10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.1	□□□□□ -0.79
RNF10-223	ENST00000545419	ST18	O60284	1047 aa		10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	PTPRE	P23469	700 aa		10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	CRAMP1	Q96RY5	1269 aa		10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	METTL22	Q9BUU2	404 aa	Predicted RBP	10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	TRMT112	Q9UI30	125 aa	Known RBP	10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	KIAA1551	Q9HCM1	1747 aa		10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	NUP98	P52948	1817 aa		10.09	□□□□□ -0.79
RNF10-223	ENST00000545419	GOLGB1	Q14789	3259 aa	Known RBP	10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	PI4KAP2	A4QPH2	592 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	IRF6	O14896	467 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	EMP3	P54852	163 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	G2E3	Q7L622	706 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	PI4KAP1	Q8N8J0	262 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	CCDC191	Q8NCU4	936 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	FAM163A	Q96GL9	167 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	SH3TC1	Q8TE82	1336 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	SCN7A	Q01118	1682 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	BCOR	Q6W2J9	1755 aa		10.08	□□□□□ -0.8
RNF10-223	ENST00000545419	ATP5J2-PTCD1	G3V325	749 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	TCERG1	O14776	1098 aa	Known RBP	10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	C21orf2	O43822	256 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	BBOX1	O75936	387 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	GRIPAP1	Q4V328	841 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	SOGA3	Q5TF21	947 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	CC2D2B	Q6DHV5	1058 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	SYNE4	Q8N205	404 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	ZNF428	Q96B54	188 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	CHD4	Q14839	1912 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	HSP90B1	P14625	803 aa	Known RBP	10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	SF3B3	Q15393	1217 aa	Known RBP	10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	PRPF40B	Q6NWY9	871 aa	Known RBP	10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	FAM89A	Q96GI7	184 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	CDCA7L	Q96GN5	454 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	RBM17	Q96I25	401 aa	Known RBP	10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	MAP3K2	Q9Y2U5	619 aa		10.07	□□□□□ -0.8
RNF10-223	ENST00000545419	RIC1	Q4ADV7	1423 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	LTBP3	Q9NS15	1303 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419		H7C1W4	665 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	PCCA	P05165	728 aa	Predicted RBP	10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	IGKV5-2	P06315	115 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	HCLS1	P14317	486 aa	Predicted RBP	10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	LMNB1	P20700	586 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	FECH	P22830	423 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	FLII	Q13045	1269 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	C9orf131	Q5VYM1	1079 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	RTKN2	Q8IZC4	609 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	MYD88	Q99836	296 aa		10.06	□□□□□ -0.8
RNF10-223	ENST00000545419	BRCA1	P38398	1863 aa	Known RBP	10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	NFKBIE	O00221	500 aa		10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	NEXN	Q0ZGT2	675 aa		10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	VARS2	Q5ST30	1063 aa	Known RBP	10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	RPGR	Q92834	1020 aa	Known RBP	10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	CCDC102A	Q96A19	550 aa		10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	CWC25	Q9NXE8	425 aa	Predicted RBP	10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	RBM27	Q9P2N5	1060 aa	Known RBP	10.05	□□□□□ -0.8
RNF10-223	ENST00000545419	ANKRD31	Q8N7Z5	1873 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	ADCY9	O60503	1353 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	ABCC12	Q96J65	1359 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	PPP1R3G	B7ZBB8	358 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	IRS4	O14654	1257 aa	Predicted RBP	10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	TRIM66	O15016	1216 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	CT47B1	P0C2W7	299 aa	Predicted RBP	10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	PRELP	P51888	382 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	SP8	Q8IXZ3	490 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	LINS1	Q8NG48	757 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	DNAAF4	Q8WXU2	420 aa		10.04	□□□□□ -0.8
RNF10-223	ENST00000545419	ARFGEF1	Q9Y6D6	1849 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	NEURL1B	A8MQ27	555 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	BRPF1	P55201	1214 aa	Predicted RBP	10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	PRSS12	P56730	875 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	FKBP5	Q13451	457 aa	Predicted RBP	10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	GCKR	Q14397	625 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	ALDH1L2	Q3SY69	923 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	CCDC93	Q567U6	631 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	DDX46	Q7L014	1031 aa	Known RBP	10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	TMC4	Q7Z404	712 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	MRPL50	Q8N5N7	158 aa	Known RBP	10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	MARVELD3	Q96A59	401 aa		10.03	□□□□□ -0.8
RNF10-223	ENST00000545419	KCNK17	Q96T54	332 aa		10.03	□□□□□ -0.8

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