RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-223ENST00000545153 WTIPA6NIX2 430 aaPredicted RBP18.04■□□□□ 0.48
PTPN6-223ENST00000545153 TRIM27P14373 513 aa18.04■□□□□ 0.48
PTPN6-223ENST00000545153 VEGFAP15692 232 aaPredicted RBP18.04■□□□□ 0.48
PTPN6-223ENST00000545153 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
PTPN6-223ENST00000545153 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
PTPN6-223ENST00000545153 EYA3Q99504 573 aa18.04■□□□□ 0.48
PTPN6-223ENST00000545153 ZC3H12CQ9C0D7 883 aaKnown RBP18.04■□□□□ 0.48
PTPN6-223ENST00000545153 ZNRF3Q9ULT6 936 aa18.04■□□□□ 0.48
PTPN6-223ENST00000545153 GJA3Q9Y6H8 435 aa18.04■□□□□ 0.48
PTPN6-223ENST00000545153 TAF1P21675 1872 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 XDHP47989 1333 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 POTECB2RU33 542 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 UFL1O94874 794 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 ATP2B4P23634 1241 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 ANKRD44Q8N8A2 993 aa18.03■□□□□ 0.48
PTPN6-223ENST00000545153 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
PTPN6-223ENST00000545153 DOK7Q18PE1 504 aa18.02■□□□□ 0.48
PTPN6-223ENST00000545153 RABL6Q3YEC7 729 aaPredicted RBP18.02■□□□□ 0.48
PTPN6-223ENST00000545153 C16orf71Q8IYS4 520 aaPredicted RBP18.02■□□□□ 0.48
PTPN6-223ENST00000545153 UBTFL1P0CB47 393 aaPredicted RBP18.01■□□□□ 0.47
PTPN6-223ENST00000545153 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
PTPN6-223ENST00000545153 GPC2Q8N158 579 aa18.01■□□□□ 0.47
PTPN6-223ENST00000545153 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
PTPN6-223ENST00000545153 ANKRD2Q9GZV1 360 aa18.01■□□□□ 0.47
PTPN6-223ENST00000545153 COL4A5P29400 1685 aa18.01■□□□□ 0.47
PTPN6-223ENST00000545153 CHRNDQ07001 517 aa18■□□□□ 0.47
PTPN6-223ENST00000545153 CXCL9Q07325 125 aa18■□□□□ 0.47
PTPN6-223ENST00000545153 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
PTPN6-223ENST00000545153 MEIS3Q99687 375 aa18■□□□□ 0.47
PTPN6-223ENST00000545153 DBNDD1Q9H9R9 158 aa18■□□□□ 0.47
PTPN6-223ENST00000545153 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
PTPN6-223ENST00000545153 G3V3G9 751 aa17.99■□□□□ 0.47
PTPN6-223ENST00000545153 RAD17O75943 681 aa17.99■□□□□ 0.47
PTPN6-223ENST00000545153 TOMM70O94826 608 aa17.99■□□□□ 0.47
PTPN6-223ENST00000545153 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
PTPN6-223ENST00000545153 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
PTPN6-223ENST00000545153 LEMD3Q9Y2U8 911 aa17.99■□□□□ 0.47
PTPN6-223ENST00000545153 YDJCA8MPS7 323 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 PLIN1O60240 522 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 TAF5LO75529 589 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 CIAPIN1Q6FI81 312 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
PTPN6-223ENST00000545153 PUS3Q9BZE2 481 aaKnown RBP17.98■□□□□ 0.47
PTPN6-223ENST00000545153 KCNQ5Q9NR82 932 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 ZNF804BA4D1E1 1349 aa17.98■□□□□ 0.47
PTPN6-223ENST00000545153 CCDC88AQ3V6T2 1871 aa17.97■□□□□ 0.47
PTPN6-223ENST00000545153 DUOX1Q9NRD9 1551 aa17.97■□□□□ 0.47
PTPN6-223ENST00000545153 ECE2O60344 883 aa17.97■□□□□ 0.47
PTPN6-223ENST00000545153 GNAI3P08754 354 aa17.97■□□□□ 0.47
PTPN6-223ENST00000545153 TNIP1Q15025 636 aa17.97■□□□□ 0.47
PTPN6-223ENST00000545153 DZIP1LQ8IYY4 767 aaKnown RBP17.97■□□□□ 0.47
PTPN6-223ENST00000545153 RCAN3Q9UKA8 241 aa17.97■□□□□ 0.47
PTPN6-223ENST00000545153 LRRFIP2Q9Y608 721 aaKnown RBP17.97■□□□□ 0.47
PTPN6-223ENST00000545153 IQCA1LA6NCM1 817 aa17.96■□□□□ 0.47
PTPN6-223ENST00000545153 SNAP23O00161 211 aa17.96■□□□□ 0.47
PTPN6-223ENST00000545153 KCNJ4P48050 445 aa17.96■□□□□ 0.47
PTPN6-223ENST00000545153 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
PTPN6-223ENST00000545153 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
PTPN6-223ENST00000545153 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
PTPN6-223ENST00000545153 TIAM2Q8IVF5 1701 aa17.95■□□□□ 0.46
PTPN6-223ENST00000545153 TXNRD3Q86VQ6 643 aa17.95■□□□□ 0.46
PTPN6-223ENST00000545153 RBM46Q8TBY0 533 aaKnown RBP17.95■□□□□ 0.46
PTPN6-223ENST00000545153 TAF1DQ9H5J8 278 aaPredicted RBP17.95■□□□□ 0.46
PTPN6-223ENST00000545153 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
PTPN6-223ENST00000545153 LRRC37AA6NMS7 1700 aa17.95■□□□□ 0.46
PTPN6-223ENST00000545153 RLBP1P12271 317 aa17.94■□□□□ 0.46
PTPN6-223ENST00000545153 RFX5P48382 616 aaPredicted RBP17.94■□□□□ 0.46
PTPN6-223ENST00000545153 GMPSP49915 693 aaPredicted RBP17.94■□□□□ 0.46
PTPN6-223ENST00000545153 LRRC24Q50LG9 513 aa17.94■□□□□ 0.46
PTPN6-223ENST00000545153 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
PTPN6-223ENST00000545153 PSMD14O00487 310 aa17.93■□□□□ 0.46
PTPN6-223ENST00000545153 KLRK1P26718 216 aa17.93■□□□□ 0.46
PTPN6-223ENST00000545153 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
PTPN6-223ENST00000545153 EPHX2P34913 555 aa17.93■□□□□ 0.46
PTPN6-223ENST00000545153 EPS15P42566 896 aa17.93■□□□□ 0.46
PTPN6-223ENST00000545153 SCNN1DP51172 638 aa17.93■□□□□ 0.46
PTPN6-223ENST00000545153 ZBTB12Q9Y330 459 aaPredicted RBP17.93■□□□□ 0.46
PTPN6-223ENST00000545153 MED23Q9ULK4 1368 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 GNAI2P04899 355 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 POTEIP0CG38 1075 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 POTEJP0CG39 1038 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 PTPN12Q05209 780 aaKnown RBP17.92■□□□□ 0.46
PTPN6-223ENST00000545153 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
PTPN6-223ENST00000545153 PODNQ7Z5L7 613 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 PANK1Q8TE04 598 aa17.92■□□□□ 0.46
PTPN6-223ENST00000545153 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
PTPN6-223ENST00000545153 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
PTPN6-223ENST00000545153 COA1Q9GZY4 146 aa17.91■□□□□ 0.46
PTPN6-223ENST00000545153 GPRC5DQ9NZD1 345 aa17.91■□□□□ 0.46
PTPN6-223ENST00000545153 CLEC11AQ9Y240 323 aa17.91■□□□□ 0.46
PTPN6-223ENST00000545153 MROH5Q6ZUA9 1318 aa17.91■□□□□ 0.46
PTPN6-223ENST00000545153 WDR90Q96KV7 1748 aa17.9■□□□□ 0.46
PTPN6-223ENST00000545153 EYA2O00167 538 aa17.9■□□□□ 0.46
PTPN6-223ENST00000545153 ZBTB7BO15156 539 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-223ENST00000545153 VIL1P09327 827 aaKnown RBP17.9■□□□□ 0.46
PTPN6-223ENST00000545153 MS4A1P11836 297 aa17.9■□□□□ 0.46
PTPN6-223ENST00000545153 FSTL1Q12841 308 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms