RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
CPSF7-223ENST00000544669 LAMB4A4D0S4 1761 aa15.38■□□□□ 0.05
CPSF7-223ENST00000544669 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
CPSF7-223ENST00000544669 ZMYM1Q5SVZ6 1142 aa15.37■□□□□ 0.05
CPSF7-223ENST00000544669 RBM43Q6ZSC3 357 aaKnown RBP15.37■□□□□ 0.05
CPSF7-223ENST00000544669 Q6ZUG5 572 aa15.37■□□□□ 0.05
CPSF7-223ENST00000544669 CDC37L1Q7L3B6 337 aa15.37■□□□□ 0.05
CPSF7-223ENST00000544669 SMARCC2Q8TAQ2 1214 aa15.37■□□□□ 0.05
CPSF7-223ENST00000544669 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
CPSF7-223ENST00000544669 AGXT2Q9BYV1 514 aa15.37■□□□□ 0.05
CPSF7-223ENST00000544669 R3HCC1Q9Y3T6 440 aaKnown RBP15.37■□□□□ 0.05
CPSF7-223ENST00000544669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
CPSF7-223ENST00000544669 GIMAP6Q6P9H5 292 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.36■□□□□ 0.05
CPSF7-223ENST00000544669 LEO1Q8WVC0 666 aaPredicted RBP15.36■□□□□ 0.05
CPSF7-223ENST00000544669 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 CEP126Q9P2H0 1117 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 SPEF2Q9C093 1822 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 RNF113AO15541 343 aaKnown RBP15.36■□□□□ 0.05
CPSF7-223ENST00000544669 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
CPSF7-223ENST00000544669 CYP21A2P08686 494 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 CHMP3Q9Y3E7 222 aa15.36■□□□□ 0.05
CPSF7-223ENST00000544669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.36■□□□□ 0.05
CPSF7-223ENST00000544669 ZNF609O15014 1411 aa15.35■□□□□ 0.05
CPSF7-223ENST00000544669 IFIT1P09914 478 aaKnown RBP15.35■□□□□ 0.05
CPSF7-223ENST00000544669 CCDC57Q2TAC2 916 aa15.35■□□□□ 0.05
CPSF7-223ENST00000544669 ATG9AQ7Z3C6 839 aa15.35■□□□□ 0.05
CPSF7-223ENST00000544669 VSIG10Q8N0Z9 540 aa15.35■□□□□ 0.05
CPSF7-223ENST00000544669 IL2RBP14784 551 aa15.34■□□□□ 0.05
CPSF7-223ENST00000544669 NOLC1Q14978 699 aaKnown RBP eCLIP15.34■□□□□ 0.05
CPSF7-223ENST00000544669 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
CPSF7-223ENST00000544669 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
CPSF7-223ENST00000544669 CARD10Q9BWT7 1032 aa15.34■□□□□ 0.05
CPSF7-223ENST00000544669 ARFGEF2Q9Y6D5 1785 aa15.34■□□□□ 0.05
CPSF7-223ENST00000544669 TYRO3Q06418 890 aa15.33■□□□□ 0.05
CPSF7-223ENST00000544669 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.05
CPSF7-223ENST00000544669 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.05
CPSF7-223ENST00000544669 BICD2Q8TD16 824 aa15.33■□□□□ 0.05
CPSF7-223ENST00000544669 PLA2G12BQ9BX93 195 aa15.33■□□□□ 0.05
CPSF7-223ENST00000544669 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.05
CPSF7-223ENST00000544669 SPTLC3Q9NUV7 552 aa15.33■□□□□ 0.05
CPSF7-223ENST00000544669 GOLIM4O00461 696 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
CPSF7-223ENST00000544669 RESTQ13127 1097 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 DHX8Q14562 1220 aaKnown RBP15.33■□□□□ 0.04
CPSF7-223ENST00000544669 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
CPSF7-223ENST00000544669 BRF1Q92994 677 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 RCOR1Q9UKL0 485 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 WDR19Q8NEZ3 1342 aa15.33■□□□□ 0.04
CPSF7-223ENST00000544669 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 EVCP57679 992 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 STK3Q13188 491 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 CHRNA2Q15822 529 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
CPSF7-223ENST00000544669 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
CPSF7-223ENST00000544669 FERMT3Q86UX7 667 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
CPSF7-223ENST00000544669 AFDNP55196 1824 aaKnown RBP15.32■□□□□ 0.04
CPSF7-223ENST00000544669 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
CPSF7-223ENST00000544669 DDX54Q8TDD1 881 aaKnown RBP15.31■□□□□ 0.04
CPSF7-223ENST00000544669 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
CPSF7-223ENST00000544669 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.31■□□□□ 0.044e-7■■■□□ 16.7
CPSF7-223ENST00000544669 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
CPSF7-223ENST00000544669 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
CPSF7-223ENST00000544669 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
CPSF7-223ENST00000544669 UQCRHP07919 91 aa15.31■□□□□ 0.04
CPSF7-223ENST00000544669 HSPD1P10809 573 aaKnown RBP15.31■□□□□ 0.04
CPSF7-223ENST00000544669 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
CPSF7-223ENST00000544669 EDC3Q96F86 508 aaKnown RBP15.31■□□□□ 0.04
CPSF7-223ENST00000544669 NEMFO60524 1076 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 STARD3NLO95772 234 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 PLCB2Q00722 1185 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 SCRN1Q12765 414 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 NSUN7Q8NE18 718 aaKnown RBP15.3■□□□□ 0.04
CPSF7-223ENST00000544669 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
CPSF7-223ENST00000544669 CABLES1Q8TDN4 633 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 ZNF512BQ96KM6 892 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-223ENST00000544669 MRVI1Q9Y6F6 885 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 TNS2Q63HR2 1409 aa15.3■□□□□ 0.04
CPSF7-223ENST00000544669 E7EWF7 191 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 CDC25BP30305 580 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 TTF1Q15361 905 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-223ENST00000544669 TAF7LQ5H9L4 462 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
CPSF7-223ENST00000544669 TFIP11Q9UBB9 837 aaKnown RBP15.29■□□□□ 0.04
CPSF7-223ENST00000544669 GOLGA6L19H0YKK7 550 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 LIG1P18858 919 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 TIMM10P62072 90 aa15.29■□□□□ 0.04
CPSF7-223ENST00000544669 MYRIPQ8NFW9 859 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms