RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 PPP1R9BQ96SB3 815 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 PRDM10Q9NQV6 1147 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 PAG1Q9NWQ8 432 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 ERCC4Q92889 916 aaPredicted RBP18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 ZNF142P52746 1687 aaPredicted RBP18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 RNF20Q5VTR2 975 aa18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 GJB4Q9NTQ9 266 aa18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 PCDH11XQ9BZA7 1347 aa18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 PCDH11YQ9BZA8 1340 aa18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 H7C1W4 665 aa18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 RABL6Q3YEC7 729 aaPredicted RBP18.75■□□□□ 0.59
SNRNP70-203ENST00000544278 KCNQ4P56696 695 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 SPC24Q8NBT2 197 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 MED23Q9ULK4 1368 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 MCMDC2Q4G0Z9 681 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
SNRNP70-203ENST00000544278 PSMA5P28066 241 aa18.73■□□□□ 0.59
SNRNP70-203ENST00000544278 CCDC57Q2TAC2 916 aa18.73■□□□□ 0.59
SNRNP70-203ENST00000544278 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.73■□□□□ 0.59
SNRNP70-203ENST00000544278 M0R2C6 588 aa18.73■□□□□ 0.59
SNRNP70-203ENST00000544278 TTC12Q9H892 705 aaPredicted RBP18.73■□□□□ 0.59
SNRNP70-203ENST00000544278 HAUS7Q99871 368 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 R3HCC1Q9Y3T6 440 aaKnown RBP18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 EYA2O00167 538 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 HIP1O00291 1037 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 CEP126Q9P2H0 1117 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 RXRAP19793 462 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 KBTBD3Q8NAB2 608 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 OSBP2Q969R2 916 aa18.72■□□□□ 0.59
SNRNP70-203ENST00000544278 ZAP70P43403 619 aa18.71■□□□□ 0.59
SNRNP70-203ENST00000544278 PDCL3Q9H2J4 239 aa18.71■□□□□ 0.59
SNRNP70-203ENST00000544278 H3BQV1 296 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 SCRN1Q12765 414 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 IFFO2Q5TF58 517 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 NKX2-3Q8TAU0 364 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 TM6SF1Q9BZW5 370 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 SH2B1Q9NRF2 756 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 ZBTB1Q9Y2K1 713 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 ALS2Q96Q42 1657 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 UBE2HP62256 183 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 SLC4A9Q96Q91 983 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 GREM2Q9H772 168 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 SCN11AQ9UI33 1791 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 AP5Z1O43299 807 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 TTC39AQ5SRH9 613 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 CCDC183Q5T5S1 534 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 XAGE2Q96GT9 111 aa18.7■□□□□ 0.58
SNRNP70-203ENST00000544278 MAST3O60307 1309 aa18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 GOLGA6L4A6NEF3 574 aa18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 DACT1Q9NYF0 836 aa18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 IQSEC3Q9UPP2 1182 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 FAM184AQ8NB25 1140 aa18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 IL17RAQ96F46 866 aa18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 N4BP2Q86UW6 1770 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-203ENST00000544278 OVOS2A0A0G2JMS6 1433 aa18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 HSPD1P10809 573 aaKnown RBP18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 BICD2Q8TD16 824 aa18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 SIPA1L3O60292 1781 aaPredicted RBP18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 ADCY5O95622 1261 aa18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 SPATA32Q96LK8 384 aa18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 CCDC144CPQ8IYA2 1237 aa18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
SNRNP70-203ENST00000544278 METTL24Q5JXM2 366 aa18.67■□□□□ 0.58
SNRNP70-203ENST00000544278 LDHAL6AQ6ZMR3 332 aa18.67■□□□□ 0.58
SNRNP70-203ENST00000544278 KCNB2Q92953 911 aa18.67■□□□□ 0.58
SNRNP70-203ENST00000544278 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
SNRNP70-203ENST00000544278 IL15P40933 162 aaPredicted RBP18.67■□□□□ 0.58
SNRNP70-203ENST00000544278 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 KRT85P78386 507 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 PHRF1Q9P1Y6 1649 aaKnown RBP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 APPP05067 770 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 LUZP1Q86V48 1076 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 CNNM1Q9NRU3 951 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 E7EWF7 191 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 PDE4CQ08493 712 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 KIF6Q6ZMV9 814 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 PDLIM2Q96JY6 352 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 CARD10Q9BWT7 1032 aa18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNRNP70-203ENST00000544278 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 TSC1Q92574 1164 aa18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 GTF3C6Q969F1 213 aa18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 ATP6V1DQ9Y5K8 247 aa18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 COL18A1P39060 1754 aa18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 WTIPA6NIX2 430 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms