RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 LRRC37AA6NMS7 1700 aa16.99■□□□□ 0.31
SP140-213ENST00000543928 SNED1Q8TER0 1413 aa16.98■□□□□ 0.31
SP140-213ENST00000543928 IRX6P78412 446 aaPredicted RBP16.98■□□□□ 0.31
SP140-213ENST00000543928 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
SP140-213ENST00000543928 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
SP140-213ENST00000543928 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
SP140-213ENST00000543928 FER1L6Q2WGJ9 1857 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 NFKBIEO00221 500 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 GPSM2P81274 684 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 RASSF7Q02833 373 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 MPNDQ8N594 471 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 PUS3Q9BZE2 481 aaKnown RBP16.97■□□□□ 0.31
SP140-213ENST00000543928 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
SP140-213ENST00000543928 NSFL1CQ9UNZ2 370 aaKnown RBP16.97■□□□□ 0.31
SP140-213ENST00000543928 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
SP140-213ENST00000543928 POLA2Q14181 598 aa16.96■□□□□ 0.31
SP140-213ENST00000543928 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
SP140-213ENST00000543928 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.31
SP140-213ENST00000543928 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.31
SP140-213ENST00000543928 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
SP140-213ENST00000543928 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
SP140-213ENST00000543928 COPRSQ9NQ92 184 aa16.96■□□□□ 0.31
SP140-213ENST00000543928 ANKIB1Q9P2G1 1089 aa16.96■□□□□ 0.31
SP140-213ENST00000543928 EYA2O00167 538 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
SP140-213ENST00000543928 CHRNDQ07001 517 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 PSMD1Q99460 953 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 SIL1Q9H173 461 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 UTRNP46939 3433 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 XDHP47989 1333 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
SP140-213ENST00000543928 HELBQ8NG08 1087 aaPredicted RBP16.94■□□□□ 0.3
SP140-213ENST00000543928 ANKRD2Q9GZV1 360 aa16.94■□□□□ 0.3
SP140-213ENST00000543928 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
SP140-213ENST00000543928 RIPOR2Q9Y4F9 1068 aa16.94■□□□□ 0.3
SP140-213ENST00000543928 SIRT2Q8IXJ6 389 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
SP140-213ENST00000543928 POLLQ9UGP5 575 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 MROH5Q6ZUA9 1318 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
SP140-213ENST00000543928 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 HMMRO75330 724 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 TAF5LO75529 589 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 CIAO1O76071 339 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 UFL1O94874 794 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 PRELPP51888 382 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 METTL24Q5JXM2 366 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 ATG9AQ7Z3C6 839 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 SUPT20HQ8NEM7 779 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 ZNF277Q9NRM2 450 aaPredicted RBP16.92■□□□□ 0.3
SP140-213ENST00000543928 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
SP140-213ENST00000543928 WTIPA6NIX2 430 aaPredicted RBP16.91■□□□□ 0.3
SP140-213ENST00000543928 SURF6O75683 361 aaKnown RBP16.91■□□□□ 0.3
SP140-213ENST00000543928 LMNB1P20700 586 aa16.91■□□□□ 0.3
SP140-213ENST00000543928 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
SP140-213ENST00000543928 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
SP140-213ENST00000543928 AAMPQ13685 434 aa16.91■□□□□ 0.3
SP140-213ENST00000543928 GPR101Q96P66 508 aaPredicted RBP16.91■□□□□ 0.3
SP140-213ENST00000543928 LEMD3Q9Y2U8 911 aa16.91■□□□□ 0.3
SP140-213ENST00000543928 A0A1B0GUL6 1792 aa16.91■□□□□ 0.3
SP140-213ENST00000543928 SNAP23O00161 211 aa16.9■□□□□ 0.3
SP140-213ENST00000543928 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
SP140-213ENST00000543928 KCNJ4P48050 445 aa16.9■□□□□ 0.3
SP140-213ENST00000543928 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.3
SP140-213ENST00000543928 SBF1O95248 1867 aa16.9■□□□□ 0.3
SP140-213ENST00000543928 ZNF804BA4D1E1 1349 aa16.9■□□□□ 0.3
SP140-213ENST00000543928 CCDC88AQ3V6T2 1871 aa16.89■□□□□ 0.29
SP140-213ENST00000543928 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
SP140-213ENST00000543928 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
SP140-213ENST00000543928 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
SP140-213ENST00000543928 VGLL2Q8N8G2 317 aa16.89■□□□□ 0.29
SP140-213ENST00000543928 EYA3Q99504 573 aa16.89■□□□□ 0.29
SP140-213ENST00000543928 RNF181Q9P0P0 153 aa16.89■□□□□ 0.29
SP140-213ENST00000543928 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
SP140-213ENST00000543928 RIMBP2O15034 1052 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 PDE8BO95263 885 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 AOC3Q16853 763 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 LARGE2Q8N3Y3 721 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 EXOC6BQ9Y2D4 811 aa16.88■□□□□ 0.29
SP140-213ENST00000543928 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
SP140-213ENST00000543928 ZC3H12CQ9C0D7 883 aaKnown RBP16.87■□□□□ 0.29
SP140-213ENST00000543928 SASH1O94885 1247 aa16.86■□□□□ 0.29
SP140-213ENST00000543928 KLRK1P26718 216 aa16.86■□□□□ 0.29
SP140-213ENST00000543928 TFCP2Q12800 502 aa16.86■□□□□ 0.29
SP140-213ENST00000543928 UBE4AQ14139 1066 aa16.86■□□□□ 0.29
SP140-213ENST00000543928 PUM3Q15397 648 aaKnown RBP16.86■□□□□ 0.29
SP140-213ENST00000543928 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
SP140-213ENST00000543928 CHD4Q14839 1912 aa16.86■□□□□ 0.29
SP140-213ENST00000543928 COL4A5P29400 1685 aa16.85■□□□□ 0.29
SP140-213ENST00000543928 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
SP140-213ENST00000543928 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
SP140-213ENST00000543928 DICER1Q9UPY3 1922 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms