RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CALD1Q05682 793 aaKnown RBP29.28■■■□□ 2.28
CDKN3-207ENST00000543789 DLK2Q6UY11 383 aa29.28■■■□□ 2.28
CDKN3-207ENST00000543789 APAF1O14727 1248 aa29.27■■■□□ 2.28
CDKN3-207ENST00000543789 EGFRP00533 1210 aa29.27■■■□□ 2.28
CDKN3-207ENST00000543789 GNAI1P63096 354 aa29.27■■■□□ 2.28
CDKN3-207ENST00000543789 DCPSQ96C86 337 aaKnown RBP29.27■■■□□ 2.28
CDKN3-207ENST00000543789 MYD88Q99836 296 aa29.27■■■□□ 2.28
CDKN3-207ENST00000543789 SEC31BQ9NQW1 1179 aa29.27■■■□□ 2.28
CDKN3-207ENST00000543789 PODXL2Q9NZ53 605 aa29.27■■■□□ 2.28
CDKN3-207ENST00000543789 RTL9Q8NET4 1388 aa29.26■■■□□ 2.28
CDKN3-207ENST00000543789 NOGQ13253 232 aa29.26■■■□□ 2.27
CDKN3-207ENST00000543789 CCDC191Q8NCU4 936 aa29.26■■■□□ 2.27
CDKN3-207ENST00000543789 ANKIB1Q9P2G1 1089 aa29.26■■■□□ 2.27
CDKN3-207ENST00000543789 TAF1P21675 1872 aa29.25■■■□□ 2.27
CDKN3-207ENST00000543789 G3V3G9 751 aa29.25■■■□□ 2.27
CDKN3-207ENST00000543789 VIL1P09327 827 aaKnown RBP29.25■■■□□ 2.27
CDKN3-207ENST00000543789 CCDC152Q4G0S7 254 aa29.25■■■□□ 2.27
CDKN3-207ENST00000543789 DCAF8Q5TAQ9 597 aa29.25■■■□□ 2.27
CDKN3-207ENST00000543789 PRKRIP1Q9H875 184 aaPredicted RBP29.25■■■□□ 2.27
CDKN3-207ENST00000543789 CCDC85CA6NKD9 419 aa29.24■■■□□ 2.27
CDKN3-207ENST00000543789 LRRC37AA6NMS7 1700 aa29.24■■■□□ 2.27
CDKN3-207ENST00000543789 PCCAP05165 728 aaPredicted RBP29.24■■■□□ 2.27
CDKN3-207ENST00000543789 GGA1Q9UJY5 639 aa29.24■■■□□ 2.27
CDKN3-207ENST00000543789 DDX60Q8IY21 1712 aaKnown RBP29.23■■■□□ 2.27
CDKN3-207ENST00000543789 UFL1O94874 794 aa29.23■■■□□ 2.27
CDKN3-207ENST00000543789 C2orf69Q8N8R5 385 aa29.23■■■□□ 2.27
CDKN3-207ENST00000543789 CWC25Q9NXE8 425 aaPredicted RBP29.23■■■□□ 2.27
CDKN3-207ENST00000543789 PDE8AO60658 829 aa29.22■■■□□ 2.27
CDKN3-207ENST00000543789 ZIC5Q96T25 663 aa29.22■■■□□ 2.27
CDKN3-207ENST00000543789 CHMP4AQ9BY43 222 aa29.22■■■□□ 2.27
CDKN3-207ENST00000543789 GBA2Q9HCG7 927 aaPredicted RBP29.22■■■□□ 2.27
CDKN3-207ENST00000543789 ADM5C9JUS6 153 aa29.21■■■□□ 2.27
CDKN3-207ENST00000543789 KIF4BQ2VIQ3 1234 aa29.21■■■□□ 2.27
CDKN3-207ENST00000543789 RGMBQ6NW40 437 aa29.21■■■□□ 2.27
CDKN3-207ENST00000543789 C8orf58Q8NAV2 365 aa29.21■■■□□ 2.27
CDKN3-207ENST00000543789 JARID2Q92833 1246 aaPredicted RBP29.21■■■□□ 2.27
CDKN3-207ENST00000543789 METTL22Q9BUU2 404 aaPredicted RBP29.21■■■□□ 2.27
CDKN3-207ENST00000543789 DDX58O95786 925 aaKnown RBP29.2■■■□□ 2.26
CDKN3-207ENST00000543789 COL4A1P02462 1669 aa29.2■■■□□ 2.26
CDKN3-207ENST00000543789 CCDC30Q5VVM6 783 aa29.19■■■□□ 2.26
CDKN3-207ENST00000543789 SULF1Q8IWU6 871 aa29.19■■■□□ 2.26
CDKN3-207ENST00000543789 CCDC85AQ96PX6 553 aaPredicted RBP29.19■■■□□ 2.26
CDKN3-207ENST00000543789 CCDC102AQ96A19 550 aa29.18■■■□□ 2.26
CDKN3-207ENST00000543789 FAM161AQ3B820 660 aa29.17■■■□□ 2.26
CDKN3-207ENST00000543789 ANKRD18AQ8IVF6 992 aa29.17■■■□□ 2.26
CDKN3-207ENST00000543789 MCOLN1Q9GZU1 580 aa29.17■■■□□ 2.26
CDKN3-207ENST00000543789 FAM155AB1AL88 458 aaPredicted RBP29.16■■■□□ 2.26
CDKN3-207ENST00000543789 ZNF280AP59817 542 aaPredicted RBP29.16■■■□□ 2.26
CDKN3-207ENST00000543789 RSBN1LQ6PCB5 846 aaPredicted RBP29.16■■■□□ 2.26
CDKN3-207ENST00000543789 AGBL3Q8NEM8 1001 aa29.16■■■□□ 2.26
CDKN3-207ENST00000543789 GGA3Q9NZ52 723 aa29.16■■■□□ 2.26
CDKN3-207ENST00000543789 ZNF157P51786 506 aaPredicted RBP29.15■■■□□ 2.26
CDKN3-207ENST00000543789 MAP3K2Q9Y2U5 619 aa29.15■■■□□ 2.26
CDKN3-207ENST00000543789 XDHP47989 1333 aa29.15■■■□□ 2.26
CDKN3-207ENST00000543789 ATP2B4P23634 1241 aa29.14■■■□□ 2.26
CDKN3-207ENST00000543789 RGS19P49795 217 aa29.13■■■□□ 2.25
CDKN3-207ENST00000543789 KIF23Q02241 960 aaPredicted RBP29.13■■■□□ 2.25
CDKN3-207ENST00000543789 SCARF1Q14162 830 aa29.13■■■□□ 2.25
CDKN3-207ENST00000543789 ASTN2O75129 1339 aaPredicted RBP29.13■■■□□ 2.25
CDKN3-207ENST00000543789 DGKZQ13574 1117 aa29.12■■■□□ 2.25
CDKN3-207ENST00000543789 KSR2Q6VAB6 950 aa29.12■■■□□ 2.25
CDKN3-207ENST00000543789 PODNQ7Z5L7 613 aa29.12■■■□□ 2.25
CDKN3-207ENST00000543789 TSPYL6Q8N831 410 aa29.12■■■□□ 2.25
CDKN3-207ENST00000543789 CDC5LQ99459 802 aaKnown RBP29.12■■■□□ 2.25
CDKN3-207ENST00000543789 CTSWP56202 376 aa29.11■■■□□ 2.25
CDKN3-207ENST00000543789 MLLT1Q03111 559 aaPredicted RBP29.11■■■□□ 2.25
CDKN3-207ENST00000543789 CDCA5Q96FF9 252 aa29.11■■■□□ 2.25
CDKN3-207ENST00000543789 PI4KAP2A4QPH2 592 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 USP17L3A6NCW0 530 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 USP17L4A6NCW7 530 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 USP17L8P0C7I0 530 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 ANGEL2Q5VTE6 544 aaKnown RBP29.1■■■□□ 2.25
CDKN3-207ENST00000543789 USP17L1Q7RTZ2 530 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 PI4KAP1Q8N8J0 262 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 GMLQ99445 158 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 SAGE1Q9NXZ1 904 aa29.1■■■□□ 2.25
CDKN3-207ENST00000543789 IGKV5-2P06315 115 aa29.09■■■□□ 2.25
CDKN3-207ENST00000543789 TTLL11Q8NHH1 800 aa29.08■■■□□ 2.25
CDKN3-207ENST00000543789 MYOZ2Q9NPC6 264 aa29.08■■■□□ 2.25
CDKN3-207ENST00000543789 BSDC1Q9NW68 430 aaPredicted RBP29.08■■■□□ 2.25
CDKN3-207ENST00000543789 ZNF609O15014 1411 aa29.08■■■□□ 2.25
CDKN3-207ENST00000543789 SLC10A3P09131 477 aa29.07■■■□□ 2.24
CDKN3-207ENST00000543789 NEXNQ0ZGT2 675 aa29.07■■■□□ 2.24
CDKN3-207ENST00000543789 STK31Q9BXU1 1019 aa29.07■■■□□ 2.24
CDKN3-207ENST00000543789 RNF186Q9NXI6 227 aa29.07■■■□□ 2.24
CDKN3-207ENST00000543789 MINPP1Q9UNW1 487 aa29.07■■■□□ 2.24
CDKN3-207ENST00000543789 GREM2Q9H772 168 aa29.06■■■□□ 2.24
CDKN3-207ENST00000543789 WTIPA6NIX2 430 aaPredicted RBP29.05■■■□□ 2.24
CDKN3-207ENST00000543789 TRPA1O75762 1119 aa29.05■■■□□ 2.24
CDKN3-207ENST00000543789 CSRNP1Q96S65 589 aa29.05■■■□□ 2.24
CDKN3-207ENST00000543789 PITPNM2Q9BZ72 1349 aa29.04■■■□□ 2.24
CDKN3-207ENST00000543789 FKBP1BP68106 108 aa29.04■■■□□ 2.24
CDKN3-207ENST00000543789 TSR2Q969E8 191 aaKnown RBP29.04■■■□□ 2.24
CDKN3-207ENST00000543789 CWF19L2Q2TBE0 894 aaKnown RBP29.03■■■□□ 2.24
CDKN3-207ENST00000543789 SCN9AQ15858 1988 aa29.02■■■□□ 2.24
CDKN3-207ENST00000543789 NEURL1BA8MQ27 555 aa29.02■■■□□ 2.24
CDKN3-207ENST00000543789 CCT4P50991 539 aaKnown RBP29.02■■■□□ 2.24
CDKN3-207ENST00000543789 REM2Q8IYK8 340 aaPredicted RBP29.02■■■□□ 2.24
CDKN3-207ENST00000543789 MED23Q9ULK4 1368 aa29.01■■■□□ 2.24
CDKN3-207ENST00000543789 H7C1W4 665 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms