RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 TCHHQ07283 1943 aa21.15■□□□□ 0.98
PTPN6-222ENST00000543744 CCDC183Q5T5S1 534 aa21.15■□□□□ 0.98
PTPN6-222ENST00000543744 KDM4FA0A1W2PPD8 638 aa21.14■□□□□ 0.98
PTPN6-222ENST00000543744 PCCAP05165 728 aaPredicted RBP21.14■□□□□ 0.98
PTPN6-222ENST00000543744 PDLIM2Q96JY6 352 aa21.14■□□□□ 0.98
PTPN6-222ENST00000543744 FBXO3Q9UK99 471 aa21.14■□□□□ 0.98
PTPN6-222ENST00000543744 STK3Q13188 491 aa21.14■□□□□ 0.97
PTPN6-222ENST00000543744 LETM1O95202 739 aaPredicted RBP21.13■□□□□ 0.97
PTPN6-222ENST00000543744 ZMYM1Q5SVZ6 1142 aa21.13■□□□□ 0.97
PTPN6-222ENST00000543744 RNF214Q8ND24 703 aa21.13■□□□□ 0.97
PTPN6-222ENST00000543744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.13■□□□□ 0.97
PTPN6-222ENST00000543744 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
PTPN6-222ENST00000543744 TPRNQ4KMQ1 711 aa21.12■□□□□ 0.97
PTPN6-222ENST00000543744 ZBTB38Q8NAP3 1195 aaPredicted RBP21.12■□□□□ 0.97
PTPN6-222ENST00000543744 DSCC1Q9BVC3 393 aa21.12■□□□□ 0.97
PTPN6-222ENST00000543744 AKAP2Q9Y2D5 859 aa21.12■□□□□ 0.97
PTPN6-222ENST00000543744 RNF113AO15541 343 aaKnown RBP21.12■□□□□ 0.97
PTPN6-222ENST00000543744 Q6ZUG5 572 aa21.12■□□□□ 0.97
PTPN6-222ENST00000543744 PLA2G12BQ9BX93 195 aa21.12■□□□□ 0.97
PTPN6-222ENST00000543744 MAP3K15Q6ZN16 1313 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 HMGB1P09429 215 aaKnown RBP21.11■□□□□ 0.97
PTPN6-222ENST00000543744 SLFNL1Q499Z3 407 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 HS1BP3Q53T59 392 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 TAF7LQ5H9L4 462 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 CCDC158Q5M9N0 1113 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 GORABQ5T7V8 394 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 CDC37L1Q7L3B6 337 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 GIGYF2Q6Y7W6 1299 aaKnown RBP21.11■□□□□ 0.97
PTPN6-222ENST00000543744 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 GTF3C6Q969F1 213 aa21.11■□□□□ 0.97
PTPN6-222ENST00000543744 CSF1RP07333 972 aa21.1■□□□□ 0.97
PTPN6-222ENST00000543744 HSP90B1P14625 803 aaKnown RBP21.1■□□□□ 0.97
PTPN6-222ENST00000543744 FGD1P98174 961 aa21.1■□□□□ 0.97
PTPN6-222ENST00000543744 IFIT5Q13325 482 aaKnown RBP21.1■□□□□ 0.97
PTPN6-222ENST00000543744 CCDC85AQ96PX6 553 aaPredicted RBP21.1■□□□□ 0.97
PTPN6-222ENST00000543744 KRT85P78386 507 aa21.09■□□□□ 0.97
PTPN6-222ENST00000543744 TTC39AQ5SRH9 613 aa21.09■□□□□ 0.97
PTPN6-222ENST00000543744 FERMT3Q86UX7 667 aa21.09■□□□□ 0.97
PTPN6-222ENST00000543744 FKBP4Q02790 459 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPN6-222ENST00000543744 LRRFIP1Q32MZ4 808 aaKnown RBP21.09■□□□□ 0.97
PTPN6-222ENST00000543744 STOX1Q6ZVD7 989 aa21.09■□□□□ 0.97
PTPN6-222ENST00000543744 XAGE2Q96GT9 111 aa21.09■□□□□ 0.97
PTPN6-222ENST00000543744 HSPD1P10809 573 aaKnown RBP21.08■□□□□ 0.97
PTPN6-222ENST00000543744 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
PTPN6-222ENST00000543744 DHX32Q7L7V1 743 aaKnown RBP21.08■□□□□ 0.97
PTPN6-222ENST00000543744 FAM184AQ8NB25 1140 aa21.08■□□□□ 0.97
PTPN6-222ENST00000543744 MAST3O60307 1309 aa21.08■□□□□ 0.96
PTPN6-222ENST00000543744 DISP2A7MBM2 1401 aa21.08■□□□□ 0.96
PTPN6-222ENST00000543744 SPEF2Q9C093 1822 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 BRF1Q92994 677 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 CDHR2Q9BYE9 1310 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 BCL9O00512 1426 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 GPTP24298 496 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 ADORA1P30542 326 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 HLFQ16534 295 aa21.07■□□□□ 0.96
PTPN6-222ENST00000543744 CYP19A1P11511 503 aaPredicted RBP21.06■□□□□ 0.96
PTPN6-222ENST00000543744 NLRP10Q86W26 655 aa21.06■□□□□ 0.96
PTPN6-222ENST00000543744 KLHL34Q8N239 644 aa21.06■□□□□ 0.96
PTPN6-222ENST00000543744 LRRC2Q9BYS8 371 aa21.06■□□□□ 0.96
PTPN6-222ENST00000543744 JAK2O60674 1132 aa21.05■□□□□ 0.96
PTPN6-222ENST00000543744 MSNP26038 577 aaKnown RBP21.05■□□□□ 0.96
PTPN6-222ENST00000543744 EXOC5O00471 708 aa21.05■□□□□ 0.96
PTPN6-222ENST00000543744 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.05■□□□□ 0.96
PTPN6-222ENST00000543744 ELP1O95163 1332 aa21.05■□□□□ 0.96
PTPN6-222ENST00000543744 ITGB4P16144 1822 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 E7EWF7 191 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 M0R2C6 588 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 ZFYP08048 801 aaPredicted RBP21.04■□□□□ 0.96
PTPN6-222ENST00000543744 FAM173BQ6P4H8 233 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 TTC6Q86TZ1 520 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 SYTL4Q96C24 671 aaPredicted RBP21.04■□□□□ 0.96
PTPN6-222ENST00000543744 SLC4A9Q96Q91 983 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 PFKFB2O60825 505 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 SCRN1Q12765 414 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 UVSSAQ2YD98 709 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 TTLL11Q8NHH1 800 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 OSBP2Q969R2 916 aa21.04■□□□□ 0.96
PTPN6-222ENST00000543744 LLPHQ9BRT6 129 aaKnown RBP21.04■□□□□ 0.96
PTPN6-222ENST00000543744 SCAND2PQ9GZW5 306 aaPredicted RBP21.04■□□□□ 0.96
PTPN6-222ENST00000543744 COL14A1Q05707 1796 aaKnown RBP21.04■□□□□ 0.96
PTPN6-222ENST00000543744 ITGA6P23229 1130 aa21.03■□□□□ 0.96
PTPN6-222ENST00000543744 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
PTPN6-222ENST00000543744 METTL24Q5JXM2 366 aa21.03■□□□□ 0.96
PTPN6-222ENST00000543744 LDHAL6AQ6ZMR3 332 aa21.03■□□□□ 0.96
PTPN6-222ENST00000543744 ATP2B3Q16720 1220 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 WASHC4Q2M389 1173 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 NOL7Q9UMY1 257 aaKnown RBP21.02■□□□□ 0.96
PTPN6-222ENST00000543744 ZBTB1Q9Y2K1 713 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 RIPOR2Q9Y4F9 1068 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 ABCC12Q96J65 1359 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 ANKRD18BA2A2Z9 1011 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 H3BQV1 296 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 CTSWP56202 376 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 IFFO2Q5TF58 517 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 GREM2Q9H772 168 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
PTPN6-222ENST00000543744 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
PTPN6-222ENST00000543744 IRS4O14654 1257 aaPredicted RBP21.01■□□□□ 0.95
PTPN6-222ENST00000543744 ZAP70P43403 619 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms