RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 STARD3NLO95772 234 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 NPR1P16066 1061 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 MRC1P22897 1456 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 COL4A5P29400 1685 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 LMOD1P29536 600 aaPredicted RBP6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 ST5P78524 1137 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 KCNC4Q03721 635 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 SZT2Q5T011 3432 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 SULT6B1Q6IMI4 303 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 GJA3Q9Y6H8 435 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 NPHP1O15259 732 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 IL6STP40189 918 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 EIF6P56537 245 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 NOGQ13253 232 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 CDCA8Q53HL2 280 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 HABP4Q5JVS0 413 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 SMYD5Q6GMV2 418 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 KCTD17Q8N5Z5 321 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 JDP2Q8WYK2 163 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 FBXW7Q969H0 707 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 PSMD1Q99460 953 aa6.62□□□□□ -1.35
NPIPB4-219ENST00000543660 SCN7AQ01118 1682 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 A0A0C4DFX4 3053 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 APBB1O00213 710 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 BCAMP50895 628 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 GCC1Q96CN9 775 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 GLIS2Q9BZE0 524 aaPredicted RBP6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 SAGE1Q9NXZ1 904 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 PGAP2Q9UHJ9 254 aa6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 ZNF330Q9Y3S2 320 aaPredicted RBP6.61□□□□□ -1.35
NPIPB4-219ENST00000543660 CUL9Q8IWT3 2517 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 UBR2Q8IWV8 1755 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 A1BGP04217 495 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 IL13P35225 146 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 MAP3K9P80192 1104 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 PROX2Q3B8N5 592 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 NBPF5PQ86XG9 351 aaPredicted RBP6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 NBPF15Q8N660 670 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 ZNF496Q96IT1 587 aaPredicted RBP6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 ZFRQ96KR1 1074 aaKnown RBP6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 ADARB2Q9NS39 739 aaKnown RBP6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 GPRC5DQ9NZD1 345 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 PCDHGA10Q9Y5H3 936 aa6.6□□□□□ -1.35
NPIPB4-219ENST00000543660 BCORQ6W2J9 1755 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 HEG1Q9ULI3 1381 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 TRPA1O75762 1119 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 ALDH1B1P30837 517 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 HIRAP54198 1017 aaPredicted RBP6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 FLIIQ13045 1269 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 CLEC4GQ6UXB4 293 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 CTU1Q7Z7A3 348 aaKnown RBP6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 LARGE2Q8N3Y3 721 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 TEX13AQ9BXU3 409 aaPredicted RBP6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 ZNF408Q9H9D4 720 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 RNF186Q9NXI6 227 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 HPS5Q9UPZ3 1129 aa6.59□□□□□ -1.35
NPIPB4-219ENST00000543660 BRCA2P51587 3418 aa6.59□□□□□ -1.36
NPIPB4-219ENST00000543660 COL9A1P20849 921 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 FXR1P51114 621 aaKnown RBP eCLIP6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 HUNKP57058 714 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 KIF23Q02241 960 aaPredicted RBP6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 MTHFSDQ2M296 383 aaKnown RBP6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 CRY2Q49AN0 593 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 CC2D2BQ6DHV5 1058 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 TYW1BQ6NUM6 668 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 RGMBQ6NW40 437 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 ZNF790Q6PG37 636 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 DLK2Q6UY11 383 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 TPTE2Q6XPS3 522 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 CDC37L1Q7L3B6 337 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 SLC51AQ86UW1 340 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 TTC5Q8N0Z6 440 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 DDX27Q96GQ7 796 aaKnown RBP6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 KIAA1468Q9P260 1216 aa6.58□□□□□ -1.36
NPIPB4-219ENST00000543660 CENPFP49454 3210 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 ZMYND10O75800 440 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 GMPSP49915 693 aaPredicted RBP6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 TRAF7Q6Q0C0 670 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 TRPM4Q8TD43 1214 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 CSRNP1Q96S65 589 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 HTTP42858 3142 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 CEP290O15078 2479 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 TRIOBPQ9H2D6 2365 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 NPC1L1Q9UHC9 1359 aa6.57□□□□□ -1.36
NPIPB4-219ENST00000543660 RANBP2P49792 3224 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 FAM177BA6PVY3 158 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 CDK11BP21127 795 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 HOXA10P31260 410 aaPredicted RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 PIP4K2AP48426 406 aaPredicted RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 CXCL9Q07325 125 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 PKN2Q16513 984 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 GRIPAP1Q4V328 841 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 USP48Q86UV5 1035 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 NIM1KQ8IY84 436 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 IL17REQ8NFR9 667 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms