RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 MRPL50Q8N5N7 158 aaKnown RBP18.15■□□□□ 0.5
VPS37B-204ENST00000543590 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
VPS37B-204ENST00000543590 GPRC5DQ9NZD1 345 aa18.15■□□□□ 0.5
VPS37B-204ENST00000543590 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
VPS37B-204ENST00000543590 ADAMTSL1Q8N6G6 1762 aa18.15■□□□□ 0.5
VPS37B-204ENST00000543590 DOK7Q18PE1 504 aa18.14■□□□□ 0.5
VPS37B-204ENST00000543590 SLC4A10Q6U841 1118 aa18.14■□□□□ 0.5
VPS37B-204ENST00000543590 BSDC1Q9NW68 430 aaPredicted RBP18.14■□□□□ 0.5
VPS37B-204ENST00000543590 XDHP47989 1333 aa18.14■□□□□ 0.49
VPS37B-204ENST00000543590 ITGBL1O95965 494 aaPredicted RBP18.14■□□□□ 0.49
VPS37B-204ENST00000543590 ITGA6P23229 1130 aa18.14■□□□□ 0.49
VPS37B-204ENST00000543590 TRMT2AQ8IZ69 625 aaKnown RBP18.14■□□□□ 0.49
VPS37B-204ENST00000543590 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
VPS37B-204ENST00000543590 ECE2O60344 883 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 ALDH1L1O75891 902 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 FOXO4P98177 505 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 MAP1SQ66K74 1059 aaPredicted RBP18.13■□□□□ 0.49
VPS37B-204ENST00000543590 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
VPS37B-204ENST00000543590 USP50Q70EL3 339 aaPredicted RBP18.13■□□□□ 0.49
VPS37B-204ENST00000543590 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 KLRG1Q96E93 195 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 SRCIN1Q9C0H9 1055 aa18.13■□□□□ 0.49
VPS37B-204ENST00000543590 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
VPS37B-204ENST00000543590 GRM8O00222 908 aa18.12■□□□□ 0.49
VPS37B-204ENST00000543590 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
VPS37B-204ENST00000543590 IGHMBP2P38935 993 aaKnown RBP18.12■□□□□ 0.49
VPS37B-204ENST00000543590 CNTROBQ8N137 903 aa18.12■□□□□ 0.49
VPS37B-204ENST00000543590 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
VPS37B-204ENST00000543590 ADARB2Q9NS39 739 aaKnown RBP18.12■□□□□ 0.49
VPS37B-204ENST00000543590 PSMD14O00487 310 aa18.11■□□□□ 0.49
VPS37B-204ENST00000543590 MIER1Q8N108 512 aa18.11■□□□□ 0.49
VPS37B-204ENST00000543590 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
VPS37B-204ENST00000543590 WTIPA6NIX2 430 aaPredicted RBP18.1■□□□□ 0.49
VPS37B-204ENST00000543590 G3V3G9 751 aa18.1■□□□□ 0.49
VPS37B-204ENST00000543590 DCAF8Q5TAQ9 597 aa18.1■□□□□ 0.49
VPS37B-204ENST00000543590 CREBZFQ9NS37 354 aa18.1■□□□□ 0.49
VPS37B-204ENST00000543590 ZBTB12Q9Y330 459 aaPredicted RBP18.1■□□□□ 0.49
VPS37B-204ENST00000543590 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
VPS37B-204ENST00000543590 MPHOSPH8Q99549 860 aa18.09■□□□□ 0.49
VPS37B-204ENST00000543590 CNOT7Q9UIV1 285 aaKnown RBP18.09■□□□□ 0.49
VPS37B-204ENST00000543590 PTPRCP08575 1304 aa18.09■□□□□ 0.49
VPS37B-204ENST00000543590 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.49
VPS37B-204ENST00000543590 CCT4P50991 539 aaKnown RBP18.08■□□□□ 0.49
VPS37B-204ENST00000543590 ALDH1L2Q3SY69 923 aa18.08■□□□□ 0.49
VPS37B-204ENST00000543590 EPHA10Q5JZY3 1008 aa18.08■□□□□ 0.49
VPS37B-204ENST00000543590 LMBR1LQ6UX01 489 aa18.08■□□□□ 0.49
VPS37B-204ENST00000543590 DPF2Q92785 391 aa18.08■□□□□ 0.49
VPS37B-204ENST00000543590 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 H7C1D1 291 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 IFIT5Q13325 482 aaKnown RBP18.07■□□□□ 0.48
VPS37B-204ENST00000543590 MICALL2Q8IY33 904 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 JMYQ8N9B5 988 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
VPS37B-204ENST00000543590 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
VPS37B-204ENST00000543590 RPS12P25398 132 aaKnown RBP18.07■□□□□ 0.48
VPS37B-204ENST00000543590 ANKRD2Q9GZV1 360 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 LEMD3Q9Y2U8 911 aa18.07■□□□□ 0.48
VPS37B-204ENST00000543590 SCN9AQ15858 1988 aa18.06■□□□□ 0.48
VPS37B-204ENST00000543590 MED23Q9ULK4 1368 aa18.06■□□□□ 0.48
VPS37B-204ENST00000543590 TMEM88BA6NKF7 163 aa18.06■□□□□ 0.48
VPS37B-204ENST00000543590 HIRAP54198 1017 aaPredicted RBP18.06■□□□□ 0.48
VPS37B-204ENST00000543590 TRPM4Q8TD43 1214 aa18.06■□□□□ 0.48
VPS37B-204ENST00000543590 UTYO14607 1347 aa18.05■□□□□ 0.48
VPS37B-204ENST00000543590 NBPF7P0C2Y1 421 aaPredicted RBP18.05■□□□□ 0.48
VPS37B-204ENST00000543590 CHRNDQ07001 517 aa18.05■□□□□ 0.48
VPS37B-204ENST00000543590 PODNQ7Z5L7 613 aa18.05■□□□□ 0.48
VPS37B-204ENST00000543590 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
VPS37B-204ENST00000543590 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
VPS37B-204ENST00000543590 PGAP2Q9UHJ9 254 aa18.05■□□□□ 0.48
VPS37B-204ENST00000543590 ZNF804BA4D1E1 1349 aa18.04■□□□□ 0.48
VPS37B-204ENST00000543590 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
VPS37B-204ENST00000543590 CCDC57Q2TAC2 916 aa18.04■□□□□ 0.48
VPS37B-204ENST00000543590 TXNRD3Q86VQ6 643 aa18.04■□□□□ 0.48
VPS37B-204ENST00000543590 ZC3H15Q8WU90 426 aaKnown RBP18.04■□□□□ 0.48
VPS37B-204ENST00000543590 SAMD7Q7Z3H4 446 aa18.03■□□□□ 0.48
VPS37B-204ENST00000543590 MKRN1Q9UHC7 482 aaKnown RBP18.03■□□□□ 0.48
VPS37B-204ENST00000543590 TRAF5O00463 557 aa18.02■□□□□ 0.48
VPS37B-204ENST00000543590 TBC1D10BQ4KMP7 808 aaPredicted RBP18.02■□□□□ 0.48
VPS37B-204ENST00000543590 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.48
VPS37B-204ENST00000543590 RSBN1LQ6PCB5 846 aaPredicted RBP18.02■□□□□ 0.48
VPS37B-204ENST00000543590 HELBQ8NG08 1087 aaPredicted RBP18.02■□□□□ 0.48
VPS37B-204ENST00000543590 ZNF594Q96JF6 807 aaPredicted RBP18.02■□□□□ 0.48
VPS37B-204ENST00000543590 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
VPS37B-204ENST00000543590 USP17L3A6NCW0 530 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 USP17L4A6NCW7 530 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 EGFRP00533 1210 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 KLRK1P26718 216 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 KCNJ4P48050 445 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 USP17L1Q7RTZ2 530 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 AGBL3Q8NEM8 1001 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 TAF5LO75529 589 aa18.01■□□□□ 0.47
VPS37B-204ENST00000543590 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
VPS37B-204ENST00000543590 RBM26Q5T8P6 1007 aaKnown RBP18.01■□□□□ 0.47
VPS37B-204ENST00000543590 GLIS2Q9BZE0 524 aaPredicted RBP18.01■□□□□ 0.47
VPS37B-204ENST00000543590 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms