RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 EYA2O00167 538 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 HSP90AB4PQ58FF6 505 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 LTBP3Q9NS15 1303 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
DDX55-210ENST00000543016 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
DDX55-210ENST00000543016 IL15P40933 162 aaPredicted RBP15.12■□□□□ 0.01
DDX55-210ENST00000543016 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
DDX55-210ENST00000543016 MPNDQ8N594 471 aa15.12■□□□□ 0.01
DDX55-210ENST00000543016 PSMD1Q99460 953 aa15.12■□□□□ 0.01
DDX55-210ENST00000543016 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
DDX55-210ENST00000543016 RIPOR2Q9Y4F9 1068 aa15.12■□□□□ 0.01
DDX55-210ENST00000543016 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
DDX55-210ENST00000543016 XDHP47989 1333 aa15.12■□□□□ 0.01
DDX55-210ENST00000543016 YBX3P16989 372 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX55-210ENST00000543016 G3BP1Q13283 466 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX55-210ENST00000543016 DPP8Q6V1X1 898 aaPredicted RBP15.11■□□□□ 0.01
DDX55-210ENST00000543016 EXOC6Q8TAG9 804 aa15.11■□□□□ 0.01
DDX55-210ENST00000543016 ZNF594Q96JF6 807 aaPredicted RBP15.11■□□□□ 0.01
DDX55-210ENST00000543016 RTFDC1Q9BY42 306 aaPredicted RBP15.11■□□□□ 0.01
DDX55-210ENST00000543016 LEMD3Q9Y2U8 911 aa15.11■□□□□ 0.01
DDX55-210ENST00000543016 ATP2B4P23634 1241 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 FKBP4Q02790 459 aaKnown RBP eCLIP15.1■□□□□ 0.01
DDX55-210ENST00000543016 CHRNDQ07001 517 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 ARHGAP27Q6ZUM4 889 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 ANKIB1Q9P2G1 1089 aa15.1■□□□□ 0.01
DDX55-210ENST00000543016 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
DDX55-210ENST00000543016 SURF6O75683 361 aaKnown RBP15.09■□□□□ 0.01
DDX55-210ENST00000543016 HDAC1Q13547 482 aaPredicted RBP15.09■□□□□ 0.01
DDX55-210ENST00000543016 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
DDX55-210ENST00000543016 EYA3Q99504 573 aa15.09■□□□□ 0.01
DDX55-210ENST00000543016 CEP126Q9P2H0 1117 aa15.09■□□□□ 0.01
DDX55-210ENST00000543016 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
DDX55-210ENST00000543016 GGA1Q9UJY5 639 aa15.09■□□□□ 0.01
DDX55-210ENST00000543016 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
DDX55-210ENST00000543016 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
DDX55-210ENST00000543016 RAB11FIP3O75154 756 aa15.08■□□□□ 0
DDX55-210ENST00000543016 PDE8BO95263 885 aa15.08■□□□□ 0
DDX55-210ENST00000543016 GPSM2P81274 684 aa15.08■□□□□ 0
DDX55-210ENST00000543016 UBE4AQ14139 1066 aa15.08■□□□□ 0
DDX55-210ENST00000543016 METTL24Q5JXM2 366 aa15.08■□□□□ 0
DDX55-210ENST00000543016 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
DDX55-210ENST00000543016 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
DDX55-210ENST00000543016 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0
DDX55-210ENST00000543016 PCDHB15Q9Y5E8 787 aa15.08■□□□□ 0
DDX55-210ENST00000543016 LRRC37AA6NMS7 1700 aa15.08■□□□□ 0
DDX55-210ENST00000543016 KCNJ4P48050 445 aa15.07■□□□□ 0
DDX55-210ENST00000543016 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
DDX55-210ENST00000543016 LRRC24Q50LG9 513 aa15.07■□□□□ 0
DDX55-210ENST00000543016 TBC1D16Q8TBP0 767 aa15.07■□□□□ 0
DDX55-210ENST00000543016 RWDD1Q9H446 243 aaPredicted RBP15.07■□□□□ 0
DDX55-210ENST00000543016 PA2G4Q9UQ80 394 aaKnown RBP15.07■□□□□ 0
DDX55-210ENST00000543016 AKAP2Q9Y2D5 859 aa15.07■□□□□ 0
DDX55-210ENST00000543016 TAF1P21675 1872 aa15.06■□□□□ 0
DDX55-210ENST00000543016 C6orf229H3BNL8 230 aa15.06■□□□□ 0
DDX55-210ENST00000543016 NFKBIEO00221 500 aa15.06■□□□□ 0
DDX55-210ENST00000543016 LMNB1P20700 586 aa15.06■□□□□ 0
DDX55-210ENST00000543016 C15orf52Q6ZUT6 534 aaKnown RBP15.06■□□□□ 0
DDX55-210ENST00000543016 SIL1Q9H173 461 aa15.06■□□□□ 0
DDX55-210ENST00000543016 DCTPP1Q9H773 170 aa15.06■□□□□ 0
DDX55-210ENST00000543016 GPR108Q9NPR9 543 aa15.06■□□□□ 0
DDX55-210ENST00000543016 ZNF804BA4D1E1 1349 aa15.06■□□□□ 0
DDX55-210ENST00000543016 SRCAPQ6ZRS2 3230 aa15.06■□□□□ 0
DDX55-210ENST00000543016 UFL1O94874 794 aa15.05■□□□□ -0
DDX55-210ENST00000543016 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
DDX55-210ENST00000543016 PUM3Q15397 648 aaKnown RBP15.05■□□□□ -0
DDX55-210ENST00000543016 WASHC4Q2M389 1173 aa15.05■□□□□ -0
DDX55-210ENST00000543016 OLFM4Q6UX06 510 aa15.05■□□□□ -0
DDX55-210ENST00000543016 VGLL2Q8N8G2 317 aa15.05■□□□□ -0
DDX55-210ENST00000543016 ZC3H12CQ9C0D7 883 aaKnown RBP15.05■□□□□ -0
DDX55-210ENST00000543016 POLLQ9UGP5 575 aa15.05■□□□□ -0
DDX55-210ENST00000543016 CACNA1SQ13698 1873 aa15.04■□□□□ -0
DDX55-210ENST00000543016 FER1L6Q2WGJ9 1857 aa15.04■□□□□ -0
DDX55-210ENST00000543016 COL4A1P02462 1669 aa15.04■□□□□ -0
DDX55-210ENST00000543016 MED23Q9ULK4 1368 aa15.04■□□□□ -0
DDX55-210ENST00000543016 IFIT1P09914 478 aaKnown RBP15.04■□□□□ -0
DDX55-210ENST00000543016 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
DDX55-210ENST00000543016 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
DDX55-210ENST00000543016 LPIN2Q92539 896 aa15.04■□□□□ -0
DDX55-210ENST00000543016 GCC1Q96CN9 775 aa15.04■□□□□ -0
DDX55-210ENST00000543016 KIF1BPQ96EK5 621 aa15.04■□□□□ -0
DDX55-210ENST00000543016 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
DDX55-210ENST00000543016 TAF5LO75529 589 aa15.03■□□□□ -0
DDX55-210ENST00000543016 HELBQ8NG08 1087 aaPredicted RBP15.03■□□□□ -0
DDX55-210ENST00000543016 JDP2Q8WYK2 163 aa15.03■□□□□ -0
DDX55-210ENST00000543016 ZBTB22O15209 634 aa15.02■□□□□ -0
DDX55-210ENST00000543016 PPIP5K2O43314 1243 aa15.02■□□□□ -0
DDX55-210ENST00000543016 SASH1O94885 1247 aa15.02■□□□□ -0
DDX55-210ENST00000543016 SLC5A1P13866 664 aa15.02■□□□□ -0
DDX55-210ENST00000543016 FGFR2P21802 821 aa15.02■□□□□ -0
DDX55-210ENST00000543016 TFCP2Q12800 502 aa15.02■□□□□ -0
DDX55-210ENST00000543016 ATP2B3Q16720 1220 aa15.02■□□□□ -0
DDX55-210ENST00000543016 LARGE2Q8N3Y3 721 aa15.02■□□□□ -0
DDX55-210ENST00000543016 ZNF277Q9NRM2 450 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms