RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TCEANC2Q96MN5 208 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 PLVAPQ9BX97 442 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 SPTLC2O15270 562 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 OPA1O60313 960 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 TICAM2Q86XR7 235 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 UBE2Q2Q8WVN8 375 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 GOLGA1Q92805 767 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 LRRC2Q9BYS8 371 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
TNC-212ENST00000542877 C8orf58Q8NAV2 365 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 CTAGE9A4FU28 777 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 PSMA7O14818 248 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 TACC1O75410 805 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 GRM8O00222 908 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
TNC-212ENST00000542877 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 ZMYND15Q9H091 742 aa14.96□□□□□ -0.01
TNC-212ENST00000542877 KRT83P78385 493 aa14.96□□□□□ -0.02
TNC-212ENST00000542877 VAT1LQ9HCJ6 419 aa14.96□□□□□ -0.02
TNC-212ENST00000542877 MAPKBP1O60336 1514 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 SYCP3Q8IZU3 236 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 SELENOOQ9BVL4 669 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 TBCAO75347 108 aaKnown RBP14.95□□□□□ -0.02
TNC-212ENST00000542877 IL15P40933 162 aaPredicted RBP14.95□□□□□ -0.02
TNC-212ENST00000542877 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
TNC-212ENST00000542877 KSR2Q6VAB6 950 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 C16orf71Q8IYS4 520 aaPredicted RBP14.95□□□□□ -0.02
TNC-212ENST00000542877 ERMNQ8TAM6 284 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 MCM6Q14566 821 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 ANXA1P04083 346 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 GNAQP50148 359 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 AK2P54819 239 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 SCLT1Q96NL6 688 aa14.95□□□□□ -0.02
TNC-212ENST00000542877 GTPBP4Q9BZE4 634 aaKnown RBP14.95□□□□□ -0.02
TNC-212ENST00000542877 HSPA4P34932 840 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 NMIQ13287 307 aaPredicted RBP14.94□□□□□ -0.02
TNC-212ENST00000542877 MNAT1P51948 309 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 TBC1D5Q92609 795 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 CCDC94Q9BW85 323 aaPredicted RBP14.94□□□□□ -0.02
TNC-212ENST00000542877 ZBTB40Q9NUA8 1239 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 IFIT1BQ5T764 474 aaKnown RBP14.94□□□□□ -0.02
TNC-212ENST00000542877 C6orf163Q5TEZ5 329 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 CEP85Q6P2H3 762 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 MARCKSP29966 332 aaPredicted RBP14.94□□□□□ -0.02
TNC-212ENST00000542877 NSRP1Q9H0G5 558 aaKnown RBP14.94□□□□□ -0.02
TNC-212ENST00000542877 KRT86O43790 486 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 TUBBP07437 444 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 GSTO1P78417 241 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 ATP2B3Q16720 1220 aa14.94□□□□□ -0.02
TNC-212ENST00000542877 PRPHP41219 470 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 RAD50Q92878 1312 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 EXOC5O00471 708 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 HLA-DOAP06340 250 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 LMOD1P29536 600 aaPredicted RBP14.93□□□□□ -0.02
TNC-212ENST00000542877 ATL3Q6DD88 541 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 PLEKHM2Q8IWE5 1019 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
TNC-212ENST00000542877 TRIM75PA6NK02 468 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 HOMER2Q9NSB8 354 aa14.93□□□□□ -0.02
TNC-212ENST00000542877 PIK3C2GO75747 1445 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 BRAPQ7Z569 592 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 XAGE3Q8WTP9 111 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 RSPH14Q9UHP6 348 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 RASAL2Q9UJF2 1139 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 VAMP4O75379 141 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 CCDC152Q4G0S7 254 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 HSP90AA4PQ58FG1 418 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 PUS7Q96PZ0 661 aaKnown RBP14.92□□□□□ -0.02
TNC-212ENST00000542877 USP26Q9BXU7 913 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 SLC4A4Q9Y6R1 1079 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 PTGS1P23219 599 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 KIF5AQ12840 1032 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 RLBP1P12271 317 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 ACTN2P35609 894 aa14.92□□□□□ -0.02
TNC-212ENST00000542877 CCDC174Q6PII3 467 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 ZGPATQ8N5A5 531 aaKnown RBP14.91□□□□□ -0.02
TNC-212ENST00000542877 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 RUFY3Q7L099 469 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 JARID2Q92833 1246 aaPredicted RBP14.91□□□□□ -0.02
TNC-212ENST00000542877 PAG1Q9NWQ8 432 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 IPO4Q8TEX9 1081 aaKnown RBP14.91□□□□□ -0.02
TNC-212ENST00000542877 STX8Q9UNK0 236 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 IKBKGQ9Y6K9 419 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 CYP7A1P22680 504 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 CHMLP26374 656 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 FEZ1Q99689 392 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 STMN4Q9H169 189 aaPredicted RBP14.91□□□□□ -0.02
TNC-212ENST00000542877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.91□□□□□ -0.02
TNC-212ENST00000542877 CALM1P0DP23 149 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 CALM2P0DP24 149 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 CALM3P0DP25 149 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 TRAF1Q13077 416 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 LMBR1LQ6UX01 489 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms