RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
LDB3-207ENST00000542786 LAMB2P55268 1798 aa17.02■□□□□ 0.31
LDB3-207ENST00000542786 GOLIM4O00461 696 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 LARGE1O95461 756 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
LDB3-207ENST00000542786 MCMDC2Q4G0Z9 681 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 AKAP2Q9Y2D5 859 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
LDB3-207ENST00000542786 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 FSD2A1L4K1 749 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 SUSD4Q5VX71 490 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 ALDH8A1Q9H2A2 487 aaPredicted RBP17.01■□□□□ 0.31
LDB3-207ENST00000542786 PDRG1Q9NUG6 133 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 HMG20BQ9P0W2 317 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 CYP46A1Q9Y6A2 500 aa17.01■□□□□ 0.31
LDB3-207ENST00000542786 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
LDB3-207ENST00000542786 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
LDB3-207ENST00000542786 HELLSQ9NRZ9 838 aa17■□□□□ 0.31
LDB3-207ENST00000542786 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 SLFNL1Q499Z3 407 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 SCARF1Q14162 830 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 SKOR2Q2VWA4 1001 aaPredicted RBP16.99■□□□□ 0.31
LDB3-207ENST00000542786 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
LDB3-207ENST00000542786 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
LDB3-207ENST00000542786 RTL9Q8NET4 1388 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 KCNJ4P48050 445 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 LARP6Q9BRS8 491 aaKnown RBP16.98■□□□□ 0.31
LDB3-207ENST00000542786 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
LDB3-207ENST00000542786 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
LDB3-207ENST00000542786 NTSR2O95665 410 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 PSMA5P28066 241 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 PARP10Q53GL7 1025 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 ZNF512BQ96KM6 892 aaPredicted RBP16.97■□□□□ 0.31
LDB3-207ENST00000542786 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 MAST3O60307 1309 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 SPATA31A6Q5VVP1 1343 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 RPS6KB1P23443 525 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 METTL24Q5JXM2 366 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
LDB3-207ENST00000542786 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
LDB3-207ENST00000542786 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
LDB3-207ENST00000542786 A0A0G2JS52 829 aa16.96■□□□□ 0.31
LDB3-207ENST00000542786 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
LDB3-207ENST00000542786 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
LDB3-207ENST00000542786 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
LDB3-207ENST00000542786 DSCC1Q9BVC3 393 aa16.96■□□□□ 0.31
LDB3-207ENST00000542786 UTP14AQ9BVJ6 771 aaKnown RBP16.96■□□□□ 0.31
LDB3-207ENST00000542786 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
LDB3-207ENST00000542786 SH2B1Q9NRF2 756 aaPredicted RBP16.96■□□□□ 0.31
LDB3-207ENST00000542786 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
LDB3-207ENST00000542786 FGFR2P21802 821 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 ME3Q16798 604 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 KLHL40Q2TBA0 621 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 TTC39AQ5SRH9 613 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 TPCN1Q9ULQ1 816 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 COL4A1P02462 1669 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 BTAF1O14981 1849 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 M0R2C6 588 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 CYP21A2P08686 494 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
LDB3-207ENST00000542786 BLOC1S2Q6QNY1 142 aa16.95■□□□□ 0.3
LDB3-207ENST00000542786 RGL2O15211 777 aa16.94■□□□□ 0.3
LDB3-207ENST00000542786 FOXP2O15409 715 aa16.94■□□□□ 0.3
LDB3-207ENST00000542786 PDE8BO95263 885 aa16.94■□□□□ 0.3
LDB3-207ENST00000542786 KRT32Q14532 448 aa16.94■□□□□ 0.3
LDB3-207ENST00000542786 STOX1Q6ZVD7 989 aa16.94■□□□□ 0.3
LDB3-207ENST00000542786 CNNM1Q9NRU3 951 aa16.94■□□□□ 0.3
LDB3-207ENST00000542786 MCAMP43121 646 aa16.93■□□□□ 0.3
LDB3-207ENST00000542786 ZAP70P43403 619 aa16.93■□□□□ 0.3
LDB3-207ENST00000542786 PI16Q6UXB8 463 aa16.93■□□□□ 0.3
LDB3-207ENST00000542786 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
LDB3-207ENST00000542786 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
LDB3-207ENST00000542786 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
LDB3-207ENST00000542786 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.93■□□□□ 0.3
LDB3-207ENST00000542786 MROH5Q6ZUA9 1318 aa16.92■□□□□ 0.3
LDB3-207ENST00000542786 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
LDB3-207ENST00000542786 MYH7P12883 1935 aa16.92■□□□□ 0.3
LDB3-207ENST00000542786 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
LDB3-207ENST00000542786 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
LDB3-207ENST00000542786 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
LDB3-207ENST00000542786 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
LDB3-207ENST00000542786 ATRNO75882 1429 aa16.91■□□□□ 0.3
LDB3-207ENST00000542786 LAMA4Q16363 1823 aa16.91■□□□□ 0.3
LDB3-207ENST00000542786 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
LDB3-207ENST00000542786 ARID4AP29374 1257 aaPredicted RBP16.91■□□□□ 0.3
LDB3-207ENST00000542786 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms