RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 CASP7P55210 303 aa15.33■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 PPP1R42Q7Z4L9 355 aa15.33■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 PLA2G12BQ9BX93 195 aa15.33■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 DLL1O00548 723 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 UBE3BQ7Z3V4 1068 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 NIP7Q9Y221 180 aaKnown RBP eCLIP15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 UBN2Q6ZU65 1347 aa15.32■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 EPHX2P34913 555 aa15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 FXR1P51114 621 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 RABL6Q3YEC7 729 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 TAOK3Q9H2K8 898 aa15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 HACL1Q9UJ83 578 aa15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 C21orf2O43822 256 aa15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 GPTP24298 496 aa15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 RIC1Q4ADV7 1423 aa15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SSH3Q8TE77 659 aa15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SH3TC1Q8TE82 1336 aa15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 FMR1Q06787 632 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 PNMA8AQ86V59 439 aaPredicted RBP15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SIRT2Q8IXJ6 389 aa15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 KAZALD1Q96I82 304 aa15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 TRMT112Q9UI30 125 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 TLL2Q9Y6L7 1015 aa15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 H0YIN7 160 aa15.28■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 NTSR2O95665 410 aa15.28■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 IGHDP01880 384 aa15.28■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 POLA2Q14181 598 aa15.28■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 BICC1Q9H694 974 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SRGAP3O43295 1099 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 NFIXQ14938 502 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 SUSD4Q5VX71 490 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 CST9Q5W186 159 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 TBC1D9BQ66K14 1250 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 DCTPP1Q9H773 170 aa15.27■□□□□ 0.04
CACNA1C-IT3-201ENST00000542680 COL6A3P12111 3177 aa15.26■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 PDE8AO60658 829 aa15.26■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 HSP90AB4PQ58FF6 505 aa15.26■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 RTL9Q8NET4 1388 aa15.25■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 PNMA6EA0A0J9YXQ4 647 aa15.25■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 FOXO4P98177 505 aa15.25■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 FAM89AQ96GI7 184 aa15.25■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 SERPINB2P05120 415 aa15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 CSF1RP07333 972 aa15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 CTSWP56202 376 aa15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 NBPF5PQ86XG9 351 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 FBXO3Q9UK99 471 aa15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 NOP58Q9Y2X3 529 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 TRIOBPQ9H2D6 2365 aa15.23■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 EPHA10Q5JZY3 1008 aa15.23■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 COPRSQ9NQ92 184 aa15.23■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 LMBR1LQ6UX01 489 aa15.22■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 BICDL1Q6ZP65 573 aa15.22■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 SAPCD2Q86UD0 394 aa15.22■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 TRAF5O00463 557 aa15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 GTF2E1P29083 439 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 CNBD1Q8NA66 436 aa15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 HHIPL1Q96JK4 782 aa15.21■□□□□ 0.03
CACNA1C-IT3-201ENST00000542680 CEP290O15078 2479 aa15.21■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ST5P78524 1137 aa15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 NUCB1Q02818 461 aa15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 SF3B3Q15393 1217 aaKnown RBP15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 ABCC12Q96J65 1359 aa15.2■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 CIAO1O76071 339 aa15.19■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 IFIT5Q13325 482 aaKnown RBP15.19■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 NUTM1Q86Y26 1132 aa15.19■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 FAM177BA6PVY3 158 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 NPHP1O15259 732 aa15.18■□□□□ 0.02
CACNA1C-IT3-201ENST00000542680 PTPN12Q05209 780 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms