RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 EYA3Q99504 573 aa19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 TAF1DQ9H5J8 278 aaPredicted RBP19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 ANKIB1Q9P2G1 1089 aa19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
ECHDC2-223ENST00000542552 XDHP47989 1333 aa19.53■□□□□ 0.72
ECHDC2-223ENST00000542552 YDJCA8MPS7 323 aa19.53■□□□□ 0.72
ECHDC2-223ENST00000542552 LMBR1LQ6UX01 489 aa19.53■□□□□ 0.72
ECHDC2-223ENST00000542552 SMC1BQ8NDV3 1235 aa19.53■□□□□ 0.72
ECHDC2-223ENST00000542552 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
ECHDC2-223ENST00000542552 GJA3Q9Y6H8 435 aa19.53■□□□□ 0.72
ECHDC2-223ENST00000542552 UFL1O94874 794 aa19.52■□□□□ 0.72
ECHDC2-223ENST00000542552 IGHMBP2P38935 993 aaKnown RBP19.52■□□□□ 0.72
ECHDC2-223ENST00000542552 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
ECHDC2-223ENST00000542552 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
ECHDC2-223ENST00000542552 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
ECHDC2-223ENST00000542552 HACL1Q9UJ83 578 aa19.52■□□□□ 0.72
ECHDC2-223ENST00000542552 ANKRD18BA2A2Z9 1011 aa19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 RIMBP2O15034 1052 aa19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 ATP2B4P23634 1241 aa19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 SCNN1DP51172 638 aa19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 IFIT5Q13325 482 aaKnown RBP19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 ARHGAP45Q92619 1136 aa19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 ADAMTSL1Q8N6G6 1762 aa19.51■□□□□ 0.71
ECHDC2-223ENST00000542552 WTIPA6NIX2 430 aaPredicted RBP19.5■□□□□ 0.71
ECHDC2-223ENST00000542552 POTEIP0CG38 1075 aa19.5■□□□□ 0.71
ECHDC2-223ENST00000542552 POTEJP0CG39 1038 aa19.5■□□□□ 0.71
ECHDC2-223ENST00000542552 CIAPIN1Q6FI81 312 aa19.5■□□□□ 0.71
ECHDC2-223ENST00000542552 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
ECHDC2-223ENST00000542552 RAD17O75943 681 aa19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 EPHX2P34913 555 aa19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 CCT4P50991 539 aaKnown RBP19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 TNIP1Q15025 636 aa19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 RABL6Q3YEC7 729 aaPredicted RBP19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 MPHOSPH8Q99549 860 aa19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 DBNDD1Q9H9R9 158 aa19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 KIF16BQ96L93 1317 aa19.49■□□□□ 0.71
ECHDC2-223ENST00000542552 SCN9AQ15858 1988 aa19.48■□□□□ 0.71
ECHDC2-223ENST00000542552 A0A1B0GUL6 1792 aa19.48■□□□□ 0.71
ECHDC2-223ENST00000542552 ECE2O60344 883 aa19.48■□□□□ 0.71
ECHDC2-223ENST00000542552 DOK7Q18PE1 504 aa19.48■□□□□ 0.71
ECHDC2-223ENST00000542552 CCDC57Q2TAC2 916 aa19.48■□□□□ 0.71
ECHDC2-223ENST00000542552 ANKRD2Q9GZV1 360 aa19.48■□□□□ 0.71
ECHDC2-223ENST00000542552 MED23Q9ULK4 1368 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 BCAR3O75815 825 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 EPS15P42566 896 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 CHADLQ6NUI6 762 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 PNMA8AQ86V59 439 aaPredicted RBP19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 LDHDQ86WU2 507 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 BICC1Q9H694 974 aaKnown RBP19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 KCNQ5Q9NR82 932 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 GPRC5DQ9NZD1 345 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 LEMD3Q9Y2U8 911 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 CHMP3Q9Y3E7 222 aa19.47■□□□□ 0.71
ECHDC2-223ENST00000542552 LMOD1P29536 600 aaPredicted RBP19.46■□□□□ 0.71
ECHDC2-223ENST00000542552 GMPSP49915 693 aaPredicted RBP19.46■□□□□ 0.71
ECHDC2-223ENST00000542552 CHRNDQ07001 517 aa19.46■□□□□ 0.71
ECHDC2-223ENST00000542552 PSME4Q14997 1843 aa19.46■□□□□ 0.71
ECHDC2-223ENST00000542552 PSMD14O00487 310 aa19.45■□□□□ 0.7
ECHDC2-223ENST00000542552 APLP1P51693 650 aa19.45■□□□□ 0.7
ECHDC2-223ENST00000542552 ZNF594Q96JF6 807 aaPredicted RBP19.45■□□□□ 0.7
ECHDC2-223ENST00000542552 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
ECHDC2-223ENST00000542552 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
ECHDC2-223ENST00000542552 LDHAL6AQ6ZMR3 332 aa19.44■□□□□ 0.7
ECHDC2-223ENST00000542552 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
ECHDC2-223ENST00000542552 VIL1P09327 827 aaKnown RBP19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 TRIM27P14373 513 aa19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 EAPPQ56P03 285 aaPredicted RBP19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 USP50Q70EL3 339 aaPredicted RBP19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 PODNQ7Z5L7 613 aa19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 TXNRD3Q86VQ6 643 aa19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 DPF2Q92785 391 aa19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 IRS2Q9Y4H2 1338 aa19.43■□□□□ 0.7
ECHDC2-223ENST00000542552 ZNF609O15014 1411 aa19.42■□□□□ 0.7
ECHDC2-223ENST00000542552 TAF7LQ5H9L4 462 aa19.42■□□□□ 0.7
ECHDC2-223ENST00000542552 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
ECHDC2-223ENST00000542552 ADARB2Q9NS39 739 aaKnown RBP19.42■□□□□ 0.7
ECHDC2-223ENST00000542552 ZBTB12Q9Y330 459 aaPredicted RBP19.42■□□□□ 0.7
ECHDC2-223ENST00000542552 ZNF646O15015 1829 aaPredicted RBP19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 G3V3G9 751 aa19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 TAF5LO75529 589 aa19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 ITGBL1O95965 494 aaPredicted RBP19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 RPS12P25398 132 aaKnown RBP19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 DCAF8Q5TAQ9 597 aa19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 C15orf52Q6ZUT6 534 aaKnown RBP19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 HELBQ8NG08 1087 aaPredicted RBP19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 CNOT7Q9UIV1 285 aaKnown RBP19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 RIPOR2Q9Y4F9 1068 aa19.41■□□□□ 0.7
ECHDC2-223ENST00000542552 SNAP23O00161 211 aa19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 KLRK1P26718 216 aa19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 PUS3Q9BZE2 481 aaKnown RBP19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 COA1Q9GZY4 146 aa19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 CNNM1Q9NRU3 951 aa19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 TNNQ9UQP3 1299 aa19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
ECHDC2-223ENST00000542552 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
ECHDC2-223ENST00000542552 CLEC11AQ9Y240 323 aa19.39■□□□□ 0.69
ECHDC2-223ENST00000542552 SHTN1A0MZ66 631 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms