RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 GDF6Q6KF10 455 aaPredicted RBP8.03□□□□□ -1.12
MDM2-228ENST00000542502 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
MDM2-228ENST00000542502 DZIP1LQ8IYY4 767 aaKnown RBP8.03□□□□□ -1.12
MDM2-228ENST00000542502 TMEM130Q8N3G9 435 aa8.03□□□□□ -1.12
MDM2-228ENST00000542502 IL22RA1Q8N6P7 574 aa8.03□□□□□ -1.12
MDM2-228ENST00000542502 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
MDM2-228ENST00000542502 AKTIPQ9H8T0 292 aa8.03□□□□□ -1.12
MDM2-228ENST00000542502 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
MDM2-228ENST00000542502 BRD2P25440 801 aaKnown RBP8.02□□□□□ -1.13
MDM2-228ENST00000542502 ELOAQ14241 798 aaKnown RBP8.02□□□□□ -1.13
MDM2-228ENST00000542502 C16orf46Q6P387 395 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 PRR23CQ6ZRP0 262 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 MAP4K3Q8IVH8 894 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 DCAF11Q8TEB1 546 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 COL26A1Q96A83 441 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 SAP130Q9H0E3 1048 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 RNF112Q9ULX5 631 aa8.02□□□□□ -1.13
MDM2-228ENST00000542502 FAM69CQ0P6D2 419 aa8.01□□□□□ -1.13
MDM2-228ENST00000542502 TRIP4Q15650 581 aaPredicted RBP8.01□□□□□ -1.13
MDM2-228ENST00000542502 ZMIZ1Q9ULJ6 1067 aa8.01□□□□□ -1.13
MDM2-228ENST00000542502 F8W735 103 aaPredicted RBP8□□□□□ -1.13
MDM2-228ENST00000542502 SETDB1Q15047 1291 aa8□□□□□ -1.13
MDM2-228ENST00000542502 CACTIN-AS1Q8N1I8 211 aa8□□□□□ -1.13
MDM2-228ENST00000542502 ALX3O95076 343 aa7.99□□□□□ -1.13
MDM2-228ENST00000542502 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
MDM2-228ENST00000542502 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
MDM2-228ENST00000542502 MUC3BQ9H195 1237 aa7.99□□□□□ -1.13
MDM2-228ENST00000542502 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
MDM2-228ENST00000542502 TRIM33Q9UPN9 1127 aa7.99□□□□□ -1.13
MDM2-228ENST00000542502 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
MDM2-228ENST00000542502 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
MDM2-228ENST00000542502 FAM26DQ5JW98 314 aa7.98□□□□□ -1.13
MDM2-228ENST00000542502 OR13H1Q8NG92 308 aa7.98□□□□□ -1.13
MDM2-228ENST00000542502 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
MDM2-228ENST00000542502 TNFRSF10BO14763 440 aa7.97□□□□□ -1.13
MDM2-228ENST00000542502 Q6ZS46 218 aa7.97□□□□□ -1.13
MDM2-228ENST00000542502 CXXC1Q9P0U4 656 aaPredicted RBP7.97□□□□□ -1.13
MDM2-228ENST00000542502 PPME1Q9Y570 386 aa7.97□□□□□ -1.13
MDM2-228ENST00000542502 FSTP19883 344 aa7.96□□□□□ -1.14
MDM2-228ENST00000542502 CAPN12Q6ZSI9 719 aa7.96□□□□□ -1.14
MDM2-228ENST00000542502 PTCD1O75127 700 aaKnown RBP7.95□□□□□ -1.14
MDM2-228ENST00000542502 SRPK2P78362 688 aaKnown RBP7.95□□□□□ -1.14
MDM2-228ENST00000542502 HYAL2Q12891 473 aa7.95□□□□□ -1.14
MDM2-228ENST00000542502 NAA30Q147X3 362 aaPredicted RBP7.95□□□□□ -1.14
MDM2-228ENST00000542502 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
MDM2-228ENST00000542502 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
MDM2-228ENST00000542502 MKNK1Q9BUB5 465 aa7.95□□□□□ -1.14
MDM2-228ENST00000542502 FNDC3AQ9Y2H6 1198 aaKnown RBP7.95□□□□□ -1.14
MDM2-228ENST00000542502 ZAP70P43403 619 aa7.94□□□□□ -1.14
MDM2-228ENST00000542502 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
MDM2-228ENST00000542502 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
MDM2-228ENST00000542502 SMNDC1O75940 238 aaKnown RBP eCLIP7.93□□□□□ -1.141e-7■■□□□ 13.3
MDM2-228ENST00000542502 ATG7O95352 703 aa7.93□□□□□ -1.14
MDM2-228ENST00000542502 GLB1P16278 677 aa7.93□□□□□ -1.14
MDM2-228ENST00000542502 ATP11AP98196 1134 aa7.93□□□□□ -1.14
MDM2-228ENST00000542502 TTC39BQ5VTQ0 682 aaPredicted RBP7.93□□□□□ -1.14
MDM2-228ENST00000542502 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
MDM2-228ENST00000542502 STIM2Q9P246 746 aa7.93□□□□□ -1.14
MDM2-228ENST00000542502 EIF4G1Q04637 1599 aaKnown RBP7.93□□□□□ -1.14
MDM2-228ENST00000542502 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
MDM2-228ENST00000542502 LINC01387J3KSC0 135 aa7.92□□□□□ -1.14
MDM2-228ENST00000542502 SCNN1AP37088 669 aa7.92□□□□□ -1.14
MDM2-228ENST00000542502 TMEM164Q5U3C3 297 aa7.92□□□□□ -1.14
MDM2-228ENST00000542502 CEP135Q66GS9 1140 aa7.92□□□□□ -1.14
MDM2-228ENST00000542502 GPR152Q8TDT2 470 aa7.92□□□□□ -1.14
MDM2-228ENST00000542502 KIF4AO95239 1232 aa7.91□□□□□ -1.14
MDM2-228ENST00000542502 CDC27P30260 824 aa7.91□□□□□ -1.14
MDM2-228ENST00000542502 CD68P34810 354 aaPredicted RBP7.91□□□□□ -1.14
MDM2-228ENST00000542502 CLP1Q92989 425 aaKnown RBP7.91□□□□□ -1.14
MDM2-228ENST00000542502 UBL7Q96S82 380 aaPredicted RBP7.91□□□□□ -1.14
MDM2-228ENST00000542502 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
MDM2-228ENST00000542502 PCMTD2Q9NV79 361 aa7.91□□□□□ -1.14
MDM2-228ENST00000542502 ABI2Q9NYB9 513 aaPredicted RBP7.91□□□□□ -1.14
MDM2-228ENST00000542502 RAXQ9Y2V3 346 aa7.91□□□□□ -1.14
MDM2-228ENST00000542502 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
MDM2-228ENST00000542502 ZBTB39O15060 712 aa7.9□□□□□ -1.14
MDM2-228ENST00000542502 GSC2O15499 205 aa7.9□□□□□ -1.14
MDM2-228ENST00000542502 ABTB2Q8N961 1025 aa7.9□□□□□ -1.14
MDM2-228ENST00000542502 RASSF4Q9H2L5 321 aa7.9□□□□□ -1.14
MDM2-228ENST00000542502 TM4SF5O14894 197 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 WISP1O95388 367 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 CEP41Q9BYV8 373 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 KCNK4Q9NYG8 393 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 STOML1Q9UBI4 398 aa7.89□□□□□ -1.15
MDM2-228ENST00000542502 FSCN2O14926 492 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 DHX15O43143 795 aaKnown RBP7.88□□□□□ -1.15
MDM2-228ENST00000542502 SSTR4P31391 388 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 CD97P48960 835 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
MDM2-228ENST00000542502 ADAMTSL4Q6UY14 1074 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 ACAD11Q709F0 780 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 CEP120Q8N960 986 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 KLHL23Q8NBE8 558 aa7.88□□□□□ -1.15
MDM2-228ENST00000542502 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 CYP2E1P05181 493 aaPredicted RBP7.87□□□□□ -1.15
MDM2-228ENST00000542502 CDC25BP30305 580 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms