RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SCN9AQ15858 1988 aa25.61■■□□□ 1.69
DDX11-220ENST00000542244 TRPM7Q96QT4 1865 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 UFL1O94874 794 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 CELF2O95319 508 aaKnown RBP25.6■■□□□ 1.69
DDX11-220ENST00000542244 TBC1D10BQ4KMP7 808 aaPredicted RBP25.6■■□□□ 1.69
DDX11-220ENST00000542244 CAPNS2Q96L46 248 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 MRS2Q9HD23 443 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 PODXL2Q9NZ53 605 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 TLL2Q9Y6L7 1015 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 CDHR2Q9BYE9 1310 aa25.6■■□□□ 1.69
DDX11-220ENST00000542244 AOC2O75106 756 aa25.59■■□□□ 1.69
DDX11-220ENST00000542244 DDX58O95786 925 aaKnown RBP25.59■■□□□ 1.69
DDX11-220ENST00000542244 LBX1P52954 281 aa25.59■■□□□ 1.69
DDX11-220ENST00000542244 CCDC152Q4G0S7 254 aa25.59■■□□□ 1.69
DDX11-220ENST00000542244 PAXIP1Q6ZW49 1069 aaPredicted RBP25.59■■□□□ 1.69
DDX11-220ENST00000542244 USP48Q86UV5 1035 aa25.59■■□□□ 1.69
DDX11-220ENST00000542244 RBM26Q5T8P6 1007 aaKnown RBP25.58■■□□□ 1.69
DDX11-220ENST00000542244 ZNF408Q9H9D4 720 aa25.58■■□□□ 1.69
DDX11-220ENST00000542244 ASTN2O75129 1339 aaPredicted RBP25.58■■□□□ 1.69
DDX11-220ENST00000542244 H7C1D1 291 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 HSPA8P11142 646 aaKnown RBP25.57■■□□□ 1.68
DDX11-220ENST00000542244 DPF2Q92785 391 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 EYA3Q99504 573 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 GREM2Q9H772 168 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 SPINK5Q9NQ38 1064 aaPredicted RBP25.57■■□□□ 1.68
DDX11-220ENST00000542244 ANKIB1Q9P2G1 1089 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 FANCIQ9NVI1 1328 aa25.57■■□□□ 1.68
DDX11-220ENST00000542244 NEURL1BA8MQ27 555 aa25.56■■□□□ 1.68
DDX11-220ENST00000542244 CTCFP49711 727 aaPredicted RBP25.56■■□□□ 1.68
DDX11-220ENST00000542244 CTSWP56202 376 aa25.56■■□□□ 1.68
DDX11-220ENST00000542244 SAPCD2Q86UD0 394 aa25.56■■□□□ 1.68
DDX11-220ENST00000542244 TTLL11Q8NHH1 800 aa25.56■■□□□ 1.68
DDX11-220ENST00000542244 AIDAQ96BJ3 306 aa25.56■■□□□ 1.68
DDX11-220ENST00000542244 GGA1Q9UJY5 639 aa25.56■■□□□ 1.68
DDX11-220ENST00000542244 THSD7BQ9C0I4 1608 aa25.55■■□□□ 1.68
DDX11-220ENST00000542244 ZC3H15Q8WU90 426 aaKnown RBP25.55■■□□□ 1.68
DDX11-220ENST00000542244 STK31Q9BXU1 1019 aa25.55■■□□□ 1.68
DDX11-220ENST00000542244 ZC3H12CQ9C0D7 883 aaKnown RBP25.55■■□□□ 1.68
DDX11-220ENST00000542244 VIL1P09327 827 aaKnown RBP25.54■■□□□ 1.68
DDX11-220ENST00000542244 ANKRD18AQ8IVF6 992 aa25.54■■□□□ 1.68
DDX11-220ENST00000542244 PRDM10Q9NQV6 1147 aa25.54■■□□□ 1.68
DDX11-220ENST00000542244 IL16Q14005 1332 aa25.54■■□□□ 1.68
DDX11-220ENST00000542244 ADM5C9JUS6 153 aa25.53■■□□□ 1.68
DDX11-220ENST00000542244 H7C1W4 665 aa25.53■■□□□ 1.68
DDX11-220ENST00000542244 CDC37L1Q7L3B6 337 aa25.53■■□□□ 1.68
DDX11-220ENST00000542244 UBE3BQ7Z3V4 1068 aa25.53■■□□□ 1.68
DDX11-220ENST00000542244 ZNF316A6NFI3 1004 aaPredicted RBP25.52■■□□□ 1.68
DDX11-220ENST00000542244 VAMP4O75379 141 aa25.52■■□□□ 1.68
DDX11-220ENST00000542244 ZIC5Q96T25 663 aa25.52■■□□□ 1.68
DDX11-220ENST00000542244 TSKSQ9UJT2 592 aa25.52■■□□□ 1.68
DDX11-220ENST00000542244 CASP7P55210 303 aa25.51■■□□□ 1.67
DDX11-220ENST00000542244 EXOSC9Q06265 439 aaKnown RBP25.51■■□□□ 1.67
DDX11-220ENST00000542244 FLIIQ13045 1269 aa25.51■■□□□ 1.67
DDX11-220ENST00000542244 MINPP1Q9UNW1 487 aa25.51■■□□□ 1.67
DDX11-220ENST00000542244 SPEF2Q9C093 1822 aa25.51■■□□□ 1.67
DDX11-220ENST00000542244 HSP90B1P14625 803 aaKnown RBP25.5■■□□□ 1.67
DDX11-220ENST00000542244 XDHP47989 1333 aa25.5■■□□□ 1.67
DDX11-220ENST00000542244 MXD3Q9BW11 206 aa25.5■■□□□ 1.67
DDX11-220ENST00000542244 RPS12P25398 132 aaKnown RBP25.49■■□□□ 1.67
DDX11-220ENST00000542244 MAP2K1Q02750 393 aaPredicted RBP25.49■■□□□ 1.67
DDX11-220ENST00000542244 NEXNQ0ZGT2 675 aa25.49■■□□□ 1.67
DDX11-220ENST00000542244 GCKRQ14397 625 aa25.49■■□□□ 1.67
DDX11-220ENST00000542244 ANP32CO43423 234 aa25.48■■□□□ 1.67
DDX11-220ENST00000542244 ECE1P42892 770 aa25.48■■□□□ 1.67
DDX11-220ENST00000542244 KIF4BQ2VIQ3 1234 aa25.48■■□□□ 1.67
DDX11-220ENST00000542244 KRT26Q7Z3Y9 468 aa25.48■■□□□ 1.67
DDX11-220ENST00000542244 TXNRD3Q86VQ6 643 aa25.48■■□□□ 1.67
DDX11-220ENST00000542244 POLR2AP24928 1970 aaKnown RBP25.47■■□□□ 1.67
DDX11-220ENST00000542244 F6X3S4 739 aa25.47■■□□□ 1.67
DDX11-220ENST00000542244 KLRK1P26718 216 aa25.47■■□□□ 1.67
DDX11-220ENST00000542244 RSBN1LQ6PCB5 846 aaPredicted RBP25.47■■□□□ 1.67
DDX11-220ENST00000542244 GMLQ99445 158 aa25.47■■□□□ 1.67
DDX11-220ENST00000542244 CHMP4AQ9BY43 222 aa25.47■■□□□ 1.67
DDX11-220ENST00000542244 SCAF8Q9UPN6 1271 aaKnown RBP25.47■■□□□ 1.67
DDX11-220ENST00000542244 G3V3G9 751 aa25.46■■□□□ 1.67
DDX11-220ENST00000542244 ATP2B4P23634 1241 aa25.46■■□□□ 1.67
DDX11-220ENST00000542244 FKBP5Q13451 457 aaPredicted RBP25.46■■□□□ 1.67
DDX11-220ENST00000542244 FAM161AQ3B820 660 aa25.46■■□□□ 1.67
DDX11-220ENST00000542244 NCBP3Q53F19 620 aaKnown RBP25.46■■□□□ 1.67
DDX11-220ENST00000542244 DCAF8Q5TAQ9 597 aa25.46■■□□□ 1.67
DDX11-220ENST00000542244 DNAAF4Q8WXU2 420 aa25.46■■□□□ 1.67
DDX11-220ENST00000542244 CDC5LQ99459 802 aaKnown RBP25.46■■□□□ 1.67
DDX11-220ENST00000542244 BSDC1Q9NW68 430 aaPredicted RBP25.46■■□□□ 1.67
DDX11-220ENST00000542244 GGA3Q9NZ52 723 aa25.46■■□□□ 1.67
DDX11-220ENST00000542244 ZNF280AP59817 542 aaPredicted RBP25.45■■□□□ 1.66
DDX11-220ENST00000542244 WDR63Q8IWG1 891 aa25.45■■□□□ 1.66
DDX11-220ENST00000542244 MYH3P11055 1940 aa25.44■■□□□ 1.66
DDX11-220ENST00000542244 ZNF646O15015 1829 aaPredicted RBP25.43■■□□□ 1.66
DDX11-220ENST00000542244 SNAP23O00161 211 aa25.43■■□□□ 1.66
DDX11-220ENST00000542244 ITGA6P23229 1130 aa25.43■■□□□ 1.66
DDX11-220ENST00000542244 CCT4P50991 539 aaKnown RBP25.43■■□□□ 1.66
DDX11-220ENST00000542244 HUNKP57058 714 aa25.43■■□□□ 1.66
DDX11-220ENST00000542244 FAM9BQ8IZU0 186 aa25.43■■□□□ 1.66
DDX11-220ENST00000542244 PLA2G12BQ9BX93 195 aa25.43■■□□□ 1.66
DDX11-220ENST00000542244 PSME4Q14997 1843 aa25.42■■□□□ 1.66
DDX11-220ENST00000542244 CSF1RP07333 972 aa25.42■■□□□ 1.66
DDX11-220ENST00000542244 MAP2K2P36507 400 aa25.42■■□□□ 1.66
DDX11-220ENST00000542244 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
DDX11-220ENST00000542244 SCARF1Q14162 830 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms