RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 SPATA31A7Q8IWB4 1347 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 CTSWP56202 376 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 LRRFIP1Q32MZ4 808 aaKnown RBP12.93□□□□□ -0.34
NECAP1-206ENST00000542095 TTC39AQ5SRH9 613 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 CCDC129Q6ZRS4 1044 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
NECAP1-206ENST00000542095 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
NECAP1-206ENST00000542095 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
NECAP1-206ENST00000542095 ANKRD18BA2A2Z9 1011 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-206ENST00000542095 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-206ENST00000542095 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-206ENST00000542095 STX6O43752 255 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 MBD3O95983 291 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-206ENST00000542095 TTLL11Q8NHH1 800 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 SLIT2O94813 1529 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 A0A0G2JS52 829 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-206ENST00000542095 ITGA6P23229 1130 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 ME3Q16798 604 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 CAVIN1Q6NZI2 390 aaKnown RBP12.92□□□□□ -0.34
NECAP1-206ENST00000542095 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 RIC1Q4ADV7 1423 aa12.92□□□□□ -0.34
NECAP1-206ENST00000542095 ABCC12Q96J65 1359 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 RNF113AO15541 343 aaKnown RBP12.91□□□□□ -0.34
NECAP1-206ENST00000542095 PDE8AO60658 829 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 CHGBP05060 677 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 GJB2P29033 226 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 GREM2Q9H772 168 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 SYT1P21579 422 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
NECAP1-206ENST00000542095 ZNF445P59923 1031 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 GAS2L3Q86XJ1 694 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
NECAP1-206ENST00000542095 GPT2Q8TD30 523 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 NEK1Q96PY6 1258 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 RIPOR2Q9Y4F9 1068 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
NECAP1-206ENST00000542095 MYH14Q7Z406 1995 aaKnown RBP12.9□□□□□ -0.34
NECAP1-206ENST00000542095 TOM1O60784 492 aa12.9□□□□□ -0.34
NECAP1-206ENST00000542095 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
NECAP1-206ENST00000542095 ADORA1P30542 326 aa12.9□□□□□ -0.34
NECAP1-206ENST00000542095 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
NECAP1-206ENST00000542095 AK7Q96M32 723 aa12.9□□□□□ -0.34
NECAP1-206ENST00000542095 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
NECAP1-206ENST00000542095 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
NECAP1-206ENST00000542095 AKAP11Q9UKA4 1901 aa12.9□□□□□ -0.34
NECAP1-206ENST00000542095 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
NECAP1-206ENST00000542095 UBN2Q6ZU65 1347 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
NECAP1-206ENST00000542095 LAMB2P55268 1798 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 F13A1P00488 732 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
NECAP1-206ENST00000542095 CYP21A2P08686 494 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
NECAP1-206ENST00000542095 SIK1P57059 783 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 ST3GAL1Q11201 340 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
NECAP1-206ENST00000542095 NECAB1Q8N987 351 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 LRP5O75197 1615 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 ARAP2Q8WZ64 1704 aa12.89□□□□□ -0.35
NECAP1-206ENST00000542095 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
NECAP1-206ENST00000542095 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
NECAP1-206ENST00000542095 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
NECAP1-206ENST00000542095 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
NECAP1-206ENST00000542095 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
NECAP1-206ENST00000542095 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
NECAP1-206ENST00000542095 MAST3O60307 1309 aa12.88□□□□□ -0.35
NECAP1-206ENST00000542095 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
NECAP1-206ENST00000542095 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
NECAP1-206ENST00000542095 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
NECAP1-206ENST00000542095 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
NECAP1-206ENST00000542095 SLFNL1Q499Z3 407 aa12.87□□□□□ -0.35
NECAP1-206ENST00000542095 TMEM87AQ8NBN3 555 aa12.87□□□□□ -0.35
NECAP1-206ENST00000542095 PDCP20941 246 aa12.87□□□□□ -0.35
NECAP1-206ENST00000542095 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-206ENST00000542095 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-206ENST00000542095 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
NECAP1-206ENST00000542095 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
NECAP1-206ENST00000542095 ZNF512BQ96KM6 892 aaPredicted RBP12.86□□□□□ -0.35
NECAP1-206ENST00000542095 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
NECAP1-206ENST00000542095 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
NECAP1-206ENST00000542095 MTMR6Q9Y217 621 aa12.86□□□□□ -0.35
NECAP1-206ENST00000542095 MYO5AQ9Y4I1 1855 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms