RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SIK1P57059 783 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 ATP8B2P98198 1209 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 CHAF1AQ13111 956 aaPredicted RBP10.84□□□□□ -0.67
THBS3-211ENST00000541990 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
THBS3-211ENST00000541990 GCKRQ14397 625 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 VPS72Q15906 364 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
THBS3-211ENST00000541990 METTL22Q9BUU2 404 aaPredicted RBP10.84□□□□□ -0.67
THBS3-211ENST00000541990 SCN11AQ9UI33 1791 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 DDX58O95786 925 aaKnown RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 ADCK5Q3MIX3 580 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 LINS1Q8NG48 757 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 IL17RAQ96F46 866 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 MRVI1Q9Y6F6 885 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 RAD50Q92878 1312 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 VPS37CA5D8V6 355 aaPredicted RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 NEXNQ0ZGT2 675 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 TTC6Q86TZ1 520 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 LSG1Q9H089 658 aaKnown RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.83□□□□□ -0.68
THBS3-211ENST00000541990 CTNNA3Q9UI47 895 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 V9GYY5 206 aaPredicted RBP10.83□□□□□ -0.68
THBS3-211ENST00000541990 BCL9O00512 1426 aa10.83□□□□□ -0.68
THBS3-211ENST00000541990 STAP2Q9UGK3 403 aa10.82□□□□□ -0.68
THBS3-211ENST00000541990 CASTP20810 708 aaKnown RBP10.82□□□□□ -0.68
THBS3-211ENST00000541990 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
THBS3-211ENST00000541990 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
THBS3-211ENST00000541990 TOGARAM1Q9Y4F4 1720 aa10.82□□□□□ -0.68
THBS3-211ENST00000541990 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
THBS3-211ENST00000541990 SGSM2O43147 1006 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 ARID5BQ14865 1188 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 PI4K2BQ8TCG2 481 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 LIMCH1Q9UPQ0 1083 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.81□□□□□ -0.68
THBS3-211ENST00000541990 TRIM37O94972 964 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 TYRO3Q06418 890 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 CCDC144BQ3MJ40 725 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 CCDC8Q9H0W5 538 aaPredicted RBP10.81□□□□□ -0.68
THBS3-211ENST00000541990 SHANK3Q9BYB0 1731 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 PLCH1Q4KWH8 1693 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 USP27XA6NNY8 438 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 STARD3NLO95772 234 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 TNNT1P13805 278 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 LMBR1LQ6UX01 489 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 CDC37L1Q7L3B6 337 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 PLBD2Q8NHP8 589 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 CBX8Q9HC52 389 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 ST7Q9NRC1 585 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 TLR7Q9NYK1 1049 aaKnown RBP10.81□□□□□ -0.68
THBS3-211ENST00000541990 KCPQ6ZWJ8 1503 aa10.81□□□□□ -0.68
THBS3-211ENST00000541990 CCDC192P0DO97 292 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 PTH1RQ03431 593 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 ANO6Q4KMQ2 910 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 BARGINQ6ZT62 677 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 LINC00116Q8NCU8 138 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 PALLDQ8WX93 1383 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
THBS3-211ENST00000541990 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 DRC7Q8IY82 874 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 TCEANC2Q96MN5 208 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 TMEM51Q9NW97 253 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 OGFRQ9NZT2 677 aa10.8□□□□□ -0.68
THBS3-211ENST00000541990 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
THBS3-211ENST00000541990 VGLL3A8MV65 326 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 SNAP23O00161 211 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 CHGBP05060 677 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 SLFN14P0C7P3 912 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 ME3Q16798 604 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 ZSCAN25Q6NSZ9 544 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 DZIP3Q86Y13 1208 aaKnown RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 CACTINQ8WUQ7 758 aaKnown RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 SIPA1L3O60292 1781 aaPredicted RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 A0A087WWV3 80 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 JAKMIP1Q96N16 626 aaKnown RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 PUS3Q9BZE2 481 aaKnown RBP10.79□□□□□ -0.68
THBS3-211ENST00000541990 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
THBS3-211ENST00000541990 PRPF40BQ6NWY9 871 aaKnown RBP10.78□□□□□ -0.68
THBS3-211ENST00000541990 RHPN1Q8TCX5 695 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 SSH3Q8TE77 659 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 EDC3Q96F86 508 aaKnown RBP10.78□□□□□ -0.68
THBS3-211ENST00000541990 NUP62CLQ9H1M0 184 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 TFIP11Q9UBB9 837 aaKnown RBP10.78□□□□□ -0.68
THBS3-211ENST00000541990 DDX41Q9UJV9 622 aaKnown RBP10.78□□□□□ -0.68
THBS3-211ENST00000541990 SPATA31A6Q5VVP1 1343 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 PARP4Q9UKK3 1724 aaKnown RBP10.78□□□□□ -0.68
THBS3-211ENST00000541990 MRC1P22897 1456 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 SMTNL1A8MU46 457 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 GOLGA6L6A8MZA4 724 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms