RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 DBNDD1Q9H9R9 158 aa28.05■■■□□ 2.08
C2CD3-216ENST00000541922 BCL2L13Q9BXK5 485 aa28.04■■■□□ 2.08
C2CD3-216ENST00000541922 GPRC5DQ9NZD1 345 aa28.04■■■□□ 2.08
C2CD3-216ENST00000541922 XDHP47989 1333 aa28.03■■■□□ 2.08
C2CD3-216ENST00000541922 GMPSP49915 693 aaPredicted RBP28.03■■■□□ 2.08
C2CD3-216ENST00000541922 SLC4A10Q6U841 1118 aa28.03■■■□□ 2.08
C2CD3-216ENST00000541922 CDCA7LQ96GN5 454 aa28.03■■■□□ 2.08
C2CD3-216ENST00000541922 BSDC1Q9NW68 430 aaPredicted RBP28.03■■■□□ 2.08
C2CD3-216ENST00000541922 DOK7Q18PE1 504 aa28.02■■■□□ 2.08
C2CD3-216ENST00000541922 USP50Q70EL3 339 aaPredicted RBP28.02■■■□□ 2.08
C2CD3-216ENST00000541922 KLRG1Q96E93 195 aa28.02■■■□□ 2.08
C2CD3-216ENST00000541922 G3V3G9 751 aa28.01■■■□□ 2.07
C2CD3-216ENST00000541922 ECE2O60344 883 aa28.01■■■□□ 2.07
C2CD3-216ENST00000541922 CSF1RP07333 972 aa28.01■■■□□ 2.07
C2CD3-216ENST00000541922 ITGA6P23229 1130 aa28.01■■■□□ 2.07
C2CD3-216ENST00000541922 IGHMBP2P38935 993 aaKnown RBP28.01■■■□□ 2.07
C2CD3-216ENST00000541922 DCAF8Q5TAQ9 597 aa28.01■■■□□ 2.07
C2CD3-216ENST00000541922 MAP1SQ66K74 1059 aaPredicted RBP28.01■■■□□ 2.07
C2CD3-216ENST00000541922 MRPL50Q8N5N7 158 aaKnown RBP28.01■■■□□ 2.07
C2CD3-216ENST00000541922 ADARB2Q9NS39 739 aaKnown RBP28.01■■■□□ 2.07
C2CD3-216ENST00000541922 ITGBL1O95965 494 aaPredicted RBP28■■■□□ 2.07
C2CD3-216ENST00000541922 ATP2B4P23634 1241 aa28■■■□□ 2.07
C2CD3-216ENST00000541922 FAM161AQ3B820 660 aa28■■■□□ 2.07
C2CD3-216ENST00000541922 CNTROBQ8N137 903 aa28■■■□□ 2.07
C2CD3-216ENST00000541922 SRCIN1Q9C0H9 1055 aa28■■■□□ 2.07
C2CD3-216ENST00000541922 PASKQ96RG2 1323 aa27.99■■■□□ 2.07
C2CD3-216ENST00000541922 ALDH1L1O75891 902 aa27.99■■■□□ 2.07
C2CD3-216ENST00000541922 MINPP1Q9UNW1 487 aa27.99■■■□□ 2.07
C2CD3-216ENST00000541922 GRM8O00222 908 aa27.98■■■□□ 2.07
C2CD3-216ENST00000541922 PSMD14O00487 310 aa27.98■■■□□ 2.07
C2CD3-216ENST00000541922 SSH1Q8WYL5 1049 aa27.98■■■□□ 2.07
C2CD3-216ENST00000541922 CREBZFQ9NS37 354 aa27.98■■■□□ 2.07
C2CD3-216ENST00000541922 C9orf78Q9NZ63 289 aaPredicted RBP27.98■■■□□ 2.07
C2CD3-216ENST00000541922 DIEXFQ68CQ4 756 aaKnown RBP27.97■■■□□ 2.07
C2CD3-216ENST00000541922 MPHOSPH8Q99549 860 aa27.97■■■□□ 2.07
C2CD3-216ENST00000541922 ANKRD18BA2A2Z9 1011 aa27.96■■■□□ 2.07
C2CD3-216ENST00000541922 FOXO4P98177 505 aa27.96■■■□□ 2.07
C2CD3-216ENST00000541922 TRMT2AQ8IZ69 625 aaKnown RBP27.96■■■□□ 2.07
C2CD3-216ENST00000541922 CNOT7Q9UIV1 285 aaKnown RBP27.96■■■□□ 2.07
C2CD3-216ENST00000541922 ZBTB12Q9Y330 459 aaPredicted RBP27.96■■■□□ 2.07
C2CD3-216ENST00000541922 PTPRCP08575 1304 aa27.95■■■□□ 2.07
C2CD3-216ENST00000541922 KCNQ5Q9NR82 932 aa27.95■■■□□ 2.06
C2CD3-216ENST00000541922 CHMP3Q9Y3E7 222 aa27.95■■■□□ 2.06
C2CD3-216ENST00000541922 SCN9AQ15858 1988 aa27.94■■■□□ 2.06
C2CD3-216ENST00000541922 H7C1D1 291 aa27.94■■■□□ 2.06
C2CD3-216ENST00000541922 DPF2Q92785 391 aa27.94■■■□□ 2.06
C2CD3-216ENST00000541922 CCT4P50991 539 aaKnown RBP27.93■■■□□ 2.06
C2CD3-216ENST00000541922 IFIT5Q13325 482 aaKnown RBP27.93■■■□□ 2.06
C2CD3-216ENST00000541922 ALDH1L2Q3SY69 923 aa27.93■■■□□ 2.06
C2CD3-216ENST00000541922 MICALL2Q8IY33 904 aa27.93■■■□□ 2.06
C2CD3-216ENST00000541922 TMEM88BA6NKF7 163 aa27.92■■■□□ 2.06
C2CD3-216ENST00000541922 RPS12P25398 132 aaKnown RBP27.92■■■□□ 2.06
C2CD3-216ENST00000541922 LMBR1LQ6UX01 489 aa27.92■■■□□ 2.06
C2CD3-216ENST00000541922 MIER1Q8N108 512 aa27.92■■■□□ 2.06
C2CD3-216ENST00000541922 JMYQ8N9B5 988 aa27.92■■■□□ 2.06
C2CD3-216ENST00000541922 ANKRD2Q9GZV1 360 aa27.92■■■□□ 2.06
C2CD3-216ENST00000541922 MED23Q9ULK4 1368 aa27.91■■■□□ 2.06
C2CD3-216ENST00000541922 WTIPA6NIX2 430 aaPredicted RBP27.91■■■□□ 2.06
C2CD3-216ENST00000541922 EPHA10Q5JZY3 1008 aa27.91■■■□□ 2.06
C2CD3-216ENST00000541922 SMC4Q9NTJ3 1288 aa27.91■■■□□ 2.06
C2CD3-216ENST00000541922 LEMD3Q9Y2U8 911 aa27.91■■■□□ 2.06
C2CD3-216ENST00000541922 SHTN1A0MZ66 631 aa27.9■■■□□ 2.06
C2CD3-216ENST00000541922 CT47B1P0C2W7 299 aaPredicted RBP27.9■■■□□ 2.06
C2CD3-216ENST00000541922 VIL1P09327 827 aaKnown RBP27.89■■■□□ 2.06
C2CD3-216ENST00000541922 CCDC57Q2TAC2 916 aa27.89■■■□□ 2.06
C2CD3-216ENST00000541922 PODNQ7Z5L7 613 aa27.89■■■□□ 2.06
C2CD3-216ENST00000541922 TRPM4Q8TD43 1214 aa27.89■■■□□ 2.06
C2CD3-216ENST00000541922 PSME4Q14997 1843 aa27.88■■■□□ 2.05
C2CD3-216ENST00000541922 CHRNDQ07001 517 aa27.88■■■□□ 2.05
C2CD3-216ENST00000541922 HIRAP54198 1017 aaPredicted RBP27.87■■■□□ 2.05
C2CD3-216ENST00000541922 TAF7LQ5H9L4 462 aa27.87■■■□□ 2.05
C2CD3-216ENST00000541922 ZC3H15Q8WU90 426 aaKnown RBP27.87■■■□□ 2.05
C2CD3-216ENST00000541922 MKRN1Q9UHC7 482 aaKnown RBP27.87■■■□□ 2.05
C2CD3-216ENST00000541922 ZNF804BA4D1E1 1349 aa27.87■■■□□ 2.05
C2CD3-216ENST00000541922 NBPF7P0C2Y1 421 aaPredicted RBP27.86■■■□□ 2.05
C2CD3-216ENST00000541922 KCNJ4P48050 445 aa27.86■■■□□ 2.05
C2CD3-216ENST00000541922 SAMD7Q7Z3H4 446 aa27.86■■■□□ 2.05
C2CD3-216ENST00000541922 SUCLG2Q96I99 432 aa27.86■■■□□ 2.05
C2CD3-216ENST00000541922 PGAP2Q9UHJ9 254 aa27.86■■■□□ 2.05
C2CD3-216ENST00000541922 UTYO14607 1347 aa27.86■■■□□ 2.05
C2CD3-216ENST00000541922 TRPM7Q96QT4 1865 aa27.85■■■□□ 2.05
C2CD3-216ENST00000541922 TBC1D10BQ4KMP7 808 aaPredicted RBP27.84■■■□□ 2.05
C2CD3-216ENST00000541922 RSBN1LQ6PCB5 846 aaPredicted RBP27.84■■■□□ 2.05
C2CD3-216ENST00000541922 COA1Q9GZY4 146 aa27.84■■■□□ 2.05
C2CD3-216ENST00000541922 USP17L3A6NCW0 530 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 USP17L4A6NCW7 530 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 TRAF5O00463 557 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 FMR1Q06787 632 aaKnown RBP eCLIP27.83■■■□□ 2.05
C2CD3-216ENST00000541922 USP17L1Q7RTZ2 530 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 TXNRD3Q86VQ6 643 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 AGBL3Q8NEM8 1001 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 KAZALD1Q96I82 304 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 ZNF594Q96JF6 807 aaPredicted RBP27.83■■■□□ 2.05
C2CD3-216ENST00000541922 CNTNAP1P78357 1384 aa27.83■■■□□ 2.05
C2CD3-216ENST00000541922 A0A1B0GUL6 1792 aa27.82■■■□□ 2.04
C2CD3-216ENST00000541922 RBM26Q5T8P6 1007 aaKnown RBP27.82■■■□□ 2.04
C2CD3-216ENST00000541922 LDHAL6AQ6ZMR3 332 aa27.82■■■□□ 2.04
C2CD3-216ENST00000541922 ZNF609O15014 1411 aa27.82■■■□□ 2.04
C2CD3-216ENST00000541922 TAF5LO75529 589 aa27.81■■■□□ 2.04
C2CD3-216ENST00000541922 HELBQ8NG08 1087 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms