RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 CDC37L1Q7L3B6 337 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 GLIS2Q9BZE0 524 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-212ENST00000541866 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 WBP1LQ9NX94 342 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 PGAP2Q9UHJ9 254 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
COPS7A-212ENST00000541866 ECE2O60344 883 aa18.33■□□□□ 0.52
COPS7A-212ENST00000541866 UFL1O94874 794 aa18.33■□□□□ 0.52
COPS7A-212ENST00000541866 CELF2O95319 508 aaKnown RBP18.33■□□□□ 0.52
COPS7A-212ENST00000541866 HIRAP54198 1017 aaPredicted RBP18.33■□□□□ 0.52
COPS7A-212ENST00000541866 FAM161AQ3B820 660 aa18.33■□□□□ 0.52
COPS7A-212ENST00000541866 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.52
COPS7A-212ENST00000541866 CAPNS2Q96L46 248 aa18.33■□□□□ 0.52
COPS7A-212ENST00000541866 GPR101Q96P66 508 aaPredicted RBP18.33■□□□□ 0.52
COPS7A-212ENST00000541866 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
COPS7A-212ENST00000541866 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
COPS7A-212ENST00000541866 ZNF408Q9H9D4 720 aa18.32■□□□□ 0.52
COPS7A-212ENST00000541866 PRDM10Q9NQV6 1147 aa18.32■□□□□ 0.52
COPS7A-212ENST00000541866 PODXL2Q9NZ53 605 aa18.32■□□□□ 0.52
COPS7A-212ENST00000541866 TLL2Q9Y6L7 1015 aa18.32■□□□□ 0.52
COPS7A-212ENST00000541866 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
COPS7A-212ENST00000541866 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
COPS7A-212ENST00000541866 RBM26Q5T8P6 1007 aaKnown RBP18.31■□□□□ 0.52
COPS7A-212ENST00000541866 CYP4F22Q6NT55 531 aa18.31■□□□□ 0.52
COPS7A-212ENST00000541866 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
COPS7A-212ENST00000541866 CDC5LQ99459 802 aaKnown RBP18.31■□□□□ 0.52
COPS7A-212ENST00000541866 BEGAINQ9BUH8 593 aa18.31■□□□□ 0.52
COPS7A-212ENST00000541866 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
COPS7A-212ENST00000541866 DUOX1Q9NRD9 1551 aa18.3■□□□□ 0.52
COPS7A-212ENST00000541866 IL16Q14005 1332 aa18.3■□□□□ 0.52
COPS7A-212ENST00000541866 IGKV5-2P06315 115 aa18.3■□□□□ 0.52
COPS7A-212ENST00000541866 TBC1D10BQ4KMP7 808 aaPredicted RBP18.3■□□□□ 0.52
COPS7A-212ENST00000541866 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
COPS7A-212ENST00000541866 KCNQ5Q9NR82 932 aa18.3■□□□□ 0.52
COPS7A-212ENST00000541866 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
COPS7A-212ENST00000541866 LBX1P52954 281 aa18.29■□□□□ 0.52
COPS7A-212ENST00000541866 CTSWP56202 376 aa18.29■□□□□ 0.52
COPS7A-212ENST00000541866 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
COPS7A-212ENST00000541866 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-212ENST00000541866 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
COPS7A-212ENST00000541866 G2E3Q7L622 706 aa18.28■□□□□ 0.52
COPS7A-212ENST00000541866 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
COPS7A-212ENST00000541866 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
COPS7A-212ENST00000541866 XDHP47989 1333 aa18.27■□□□□ 0.52
COPS7A-212ENST00000541866 NEURL1BA8MQ27 555 aa18.27■□□□□ 0.52
COPS7A-212ENST00000541866 VIL1P09327 827 aaKnown RBP18.27■□□□□ 0.52
COPS7A-212ENST00000541866 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.52
COPS7A-212ENST00000541866 TTLL11Q8NHH1 800 aa18.27■□□□□ 0.52
COPS7A-212ENST00000541866 RTL9Q8NET4 1388 aa18.27■□□□□ 0.51
COPS7A-212ENST00000541866 MAP2K2P36507 400 aa18.26■□□□□ 0.51
COPS7A-212ENST00000541866 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-212ENST00000541866 KRT26Q7Z3Y9 468 aa18.26■□□□□ 0.51
COPS7A-212ENST00000541866 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
COPS7A-212ENST00000541866 COL4A1P02462 1669 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 TRPM7Q96QT4 1865 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
COPS7A-212ENST00000541866 FLIIQ13045 1269 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 KIF4BQ2VIQ3 1234 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 GREM2Q9H772 168 aa18.25■□□□□ 0.51
COPS7A-212ENST00000541866 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
COPS7A-212ENST00000541866 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 H7C1W4 665 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 AOC2O75106 756 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 EGFRP00533 1210 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 IGHMBP2P38935 993 aaKnown RBP18.24■□□□□ 0.51
COPS7A-212ENST00000541866 GCKRQ14397 625 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 RSBN1LQ6PCB5 846 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-212ENST00000541866 PODNQ7Z5L7 613 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
COPS7A-212ENST00000541866 SULF1Q8IWU6 871 aa18.23■□□□□ 0.51
COPS7A-212ENST00000541866 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
COPS7A-212ENST00000541866 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
COPS7A-212ENST00000541866 USP17L3A6NCW0 530 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 USP17L4A6NCW7 530 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 VAMP4O75379 141 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 HUNKP57058 714 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
COPS7A-212ENST00000541866 DLK2Q6UY11 383 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 USP17L1Q7RTZ2 530 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
COPS7A-212ENST00000541866 ADM5C9JUS6 153 aa18.21■□□□□ 0.51
COPS7A-212ENST00000541866 USP17L8P0C7I0 530 aa18.21■□□□□ 0.51
COPS7A-212ENST00000541866 CCT4P50991 539 aaKnown RBP18.21■□□□□ 0.51
COPS7A-212ENST00000541866 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
COPS7A-212ENST00000541866 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
COPS7A-212ENST00000541866 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
COPS7A-212ENST00000541866 FBXW7Q969H0 707 aa18.2■□□□□ 0.5
COPS7A-212ENST00000541866 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
COPS7A-212ENST00000541866 GBA2Q9HCG7 927 aaPredicted RBP18.2■□□□□ 0.5
COPS7A-212ENST00000541866 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
COPS7A-212ENST00000541866 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-212ENST00000541866 CA12O43570 354 aa18.19■□□□□ 0.5
COPS7A-212ENST00000541866 ITGA6P23229 1130 aa18.19■□□□□ 0.5
COPS7A-212ENST00000541866 ZNF280AP59817 542 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-212ENST00000541866 NOGQ13253 232 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms