RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
CIT-211ENST00000541841 USP21Q9UK80 565 aa9.22□□□□□ -0.93
CIT-211ENST00000541841 GHRHP01286 108 aa9.21□□□□□ -0.94
CIT-211ENST00000541841 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
CIT-211ENST00000541841 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
CIT-211ENST00000541841 ADGRE1Q14246 886 aa9.21□□□□□ -0.94
CIT-211ENST00000541841 TRIM33Q9UPN9 1127 aa9.21□□□□□ -0.94
CIT-211ENST00000541841 C9orf172C9J069 976 aa9.2□□□□□ -0.94
CIT-211ENST00000541841 DEAF1O75398 565 aaPredicted RBP9.2□□□□□ -0.94
CIT-211ENST00000541841 ATP11AP98196 1134 aa9.2□□□□□ -0.94
CIT-211ENST00000541841 NKAPLQ5M9Q1 402 aa9.2□□□□□ -0.94
CIT-211ENST00000541841 LENG1Q96BZ8 264 aaPredicted RBP9.2□□□□□ -0.94
CIT-211ENST00000541841 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
CIT-211ENST00000541841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
CIT-211ENST00000541841 A6NHS1 94 aa9.19□□□□□ -0.94
CIT-211ENST00000541841 SOX18P35713 384 aa9.19□□□□□ -0.94
CIT-211ENST00000541841 FBXO11Q86XK2 927 aa9.19□□□□□ -0.94
CIT-211ENST00000541841 ABTB2Q8N961 1025 aa9.19□□□□□ -0.94
CIT-211ENST00000541841 ADAMTSL4Q6UY14 1074 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 TXNRD3Q86VQ6 643 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 IL22RA1Q8N6P7 574 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 OR13H1Q8NG92 308 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 HELQQ8TDG4 1101 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 TTC9Q92623 222 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 TMEM63CQ9P1W3 806 aa9.18□□□□□ -0.94
CIT-211ENST00000541841 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
CIT-211ENST00000541841 MPSTP25325 297 aa9.17□□□□□ -0.94
CIT-211ENST00000541841 NRG1Q02297 640 aaPredicted RBP9.17□□□□□ -0.94
CIT-211ENST00000541841 DNM1Q05193 864 aaKnown RBP9.17□□□□□ -0.94
CIT-211ENST00000541841 TTC39BQ5VTQ0 682 aaPredicted RBP9.17□□□□□ -0.94
CIT-211ENST00000541841 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
CIT-211ENST00000541841 EDEM1Q92611 657 aa9.17□□□□□ -0.94
CIT-211ENST00000541841 SSFA2P28290 1259 aa9.16□□□□□ -0.94
CIT-211ENST00000541841 LACRTQ9GZZ8 138 aa9.16□□□□□ -0.94
CIT-211ENST00000541841 ABI2Q9NYB9 513 aaPredicted RBP9.16□□□□□ -0.94
CIT-211ENST00000541841 KANSL3Q9P2N6 904 aa9.16□□□□□ -0.94
CIT-211ENST00000541841 DYRK3O43781 588 aa9.15□□□□□ -0.94
CIT-211ENST00000541841 CDC25BP30305 580 aa9.15□□□□□ -0.94
CIT-211ENST00000541841 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
CIT-211ENST00000541841 TXNDC11Q6PKC3 985 aa9.15□□□□□ -0.94
CIT-211ENST00000541841 DTWD1Q8N5C7 304 aa9.15□□□□□ -0.94
CIT-211ENST00000541841 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
CIT-211ENST00000541841 RASSF4Q9H2L5 321 aa9.15□□□□□ -0.94
CIT-211ENST00000541841 FNDC3AQ9Y2H6 1198 aaKnown RBP9.15□□□□□ -0.94
CIT-211ENST00000541841 ACPPP15309 386 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 NOS3P29474 1203 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 EIF1AXP47813 144 aaKnown RBP9.14□□□□□ -0.95
CIT-211ENST00000541841 HYAL2Q12891 473 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 CEP135Q66GS9 1140 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 PHLDB3Q6NSJ2 640 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 ZNF438Q7Z4V0 828 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 TP53INP1Q96A56 240 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 GGNBP2Q9H3C7 697 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 ELP3Q9H9T3 547 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 CNTN3Q9P232 1028 aa9.14□□□□□ -0.95
CIT-211ENST00000541841 PPP1R15AO75807 674 aaPredicted RBP9.13□□□□□ -0.95
CIT-211ENST00000541841 ALX3O95076 343 aa9.13□□□□□ -0.95
CIT-211ENST00000541841 C8orf34Q49A92 452 aa9.13□□□□□ -0.95
CIT-211ENST00000541841 XP32Q5T750 250 aa9.13□□□□□ -0.95
CIT-211ENST00000541841 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
CIT-211ENST00000541841 WFDC12Q8WWY7 111 aa9.13□□□□□ -0.95
CIT-211ENST00000541841 ANO2Q9NQ90 1003 aa9.13□□□□□ -0.95
CIT-211ENST00000541841 DLL1O00548 723 aa9.12□□□□□ -0.95
CIT-211ENST00000541841 PDGFAP04085 211 aa9.12□□□□□ -0.95
CIT-211ENST00000541841 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
CIT-211ENST00000541841 NOM1Q5C9Z4 860 aaKnown RBP9.12□□□□□ -0.95
CIT-211ENST00000541841 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
CIT-211ENST00000541841 C1orf127Q8N9H9 656 aa9.12□□□□□ -0.95
CIT-211ENST00000541841 SPACA7Q96KW9 195 aa9.12□□□□□ -0.95
CIT-211ENST00000541841 LINC01387J3KSC0 135 aa9.11□□□□□ -0.95
CIT-211ENST00000541841 TRPA1O75762 1119 aa9.11□□□□□ -0.95
CIT-211ENST00000541841 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
CIT-211ENST00000541841 NCAPG2Q86XI2 1143 aa9.11□□□□□ -0.95
CIT-211ENST00000541841 Q8N3U1 123 aa9.11□□□□□ -0.95
CIT-211ENST00000541841 MEGF10Q96KG7 1140 aa9.11□□□□□ -0.95
CIT-211ENST00000541841 ZNF211Q13398 564 aaPredicted RBP9.1□□□□□ -0.95
CIT-211ENST00000541841 PRSS36Q5K4E3 855 aa9.1□□□□□ -0.95
CIT-211ENST00000541841 ZMYM1Q5SVZ6 1142 aa9.1□□□□□ -0.95
CIT-211ENST00000541841 IGF2-ASQ6U949 168 aa9.1□□□□□ -0.95
CIT-211ENST00000541841 SSBP4Q9BWG4 385 aaPredicted RBP9.1□□□□□ -0.95
CIT-211ENST00000541841 CARD10Q9BWT7 1032 aa9.1□□□□□ -0.95
CIT-211ENST00000541841 POLIQ9UNA4 740 aa9.1□□□□□ -0.95
CIT-211ENST00000541841 KIF4AO95239 1232 aa9.09□□□□□ -0.95
CIT-211ENST00000541841 ABL1P00519 1130 aa9.09□□□□□ -0.95
CIT-211ENST00000541841 PDE12Q6L8Q7 609 aaKnown RBP9.09□□□□□ -0.95
CIT-211ENST00000541841 AGGF1Q8N302 714 aaeCLIP9.09□□□□□ -0.95
CIT-211ENST00000541841 GALNT11Q8NCW6 608 aa9.09□□□□□ -0.95
CIT-211ENST00000541841 HHIPQ96QV1 700 aa9.09□□□□□ -0.95
CIT-211ENST00000541841 SH2B1Q9NRF2 756 aaPredicted RBP9.09□□□□□ -0.95
CIT-211ENST00000541841 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
CIT-211ENST00000541841 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
CIT-211ENST00000541841 AAMPQ13685 434 aa9.08□□□□□ -0.96
CIT-211ENST00000541841 CEP120Q8N960 986 aa9.08□□□□□ -0.96
CIT-211ENST00000541841 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
CIT-211ENST00000541841 CES1P23141 567 aa9.07□□□□□ -0.96
CIT-211ENST00000541841 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
CIT-211ENST00000541841 CHRDQ9H2X0 955 aa9.07□□□□□ -0.96
CIT-211ENST00000541841 KCNK4Q9NYG8 393 aa9.07□□□□□ -0.96
CIT-211ENST00000541841 WISP1O95388 367 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms