RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 CCDC152Q4G0S7 254 aa15.19■□□□□ 0.02
CLSTN3-211ENST00000541667 TRPM4Q8TD43 1214 aa15.19■□□□□ 0.02
CLSTN3-211ENST00000541667 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-211ENST00000541667 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
CLSTN3-211ENST00000541667 HSP90B1P14625 803 aaKnown RBP15.18■□□□□ 0.02
CLSTN3-211ENST00000541667 EXOSC9Q06265 439 aaKnown RBP15.18■□□□□ 0.02
CLSTN3-211ENST00000541667 DEFB115Q30KQ5 88 aa15.18■□□□□ 0.02
CLSTN3-211ENST00000541667 DPF2Q92785 391 aa15.18■□□□□ 0.02
CLSTN3-211ENST00000541667 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
CLSTN3-211ENST00000541667 ECE2O60344 883 aa15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 EGFRP00533 1210 aa15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 CTSWP56202 376 aa15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 FLIIQ13045 1269 aa15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 GREM2Q9H772 168 aa15.17■□□□□ 0.02
CLSTN3-211ENST00000541667 SCN9AQ15858 1988 aa15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 VIL1P09327 827 aaKnown RBP15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 GCKRQ14397 625 aa15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 MICALL2Q8IY33 904 aa15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 PLA2G12BQ9BX93 195 aa15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 GLIS2Q9BZE0 524 aaPredicted RBP15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 WBP1LQ9NX94 342 aa15.16■□□□□ 0.02
CLSTN3-211ENST00000541667 FOXN1O15353 648 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 CSF1RP07333 972 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 DLK2Q6UY11 383 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 SAMD7Q7Z3H4 446 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 ANKRD18AQ8IVF6 992 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 EYA3Q99504 573 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 ZC3H12CQ9C0D7 883 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-211ENST00000541667 H7C1D1 291 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 UFL1O94874 794 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 NEXNQ0ZGT2 675 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 GGA1Q9UJY5 639 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 TLL2Q9Y6L7 1015 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
CLSTN3-211ENST00000541667 RPS12P25398 132 aaKnown RBP15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 FAM9BQ8IZU0 186 aa15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 TRPM7Q96QT4 1865 aa15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 GMLQ99445 158 aa15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 ABT1Q9ULW3 272 aaKnown RBP15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 XDHP47989 1333 aa15.13■□□□□ 0.01
CLSTN3-211ENST00000541667 ATP2B4P23634 1241 aa15.12■□□□□ 0.01
CLSTN3-211ENST00000541667 CDC37L1Q7L3B6 337 aa15.12■□□□□ 0.01
CLSTN3-211ENST00000541667 SAPCD2Q86UD0 394 aa15.12■□□□□ 0.01
CLSTN3-211ENST00000541667 USP48Q86UV5 1035 aa15.12■□□□□ 0.01
CLSTN3-211ENST00000541667 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
CLSTN3-211ENST00000541667 POLR2AP24928 1970 aaKnown RBP15.12■□□□□ 0.01
CLSTN3-211ENST00000541667 F6X3S4 739 aa15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 ZNF280AP59817 542 aaPredicted RBP15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 FKBP5Q13451 457 aaPredicted RBP15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 CDC5LQ99459 802 aaKnown RBP15.11■□□□□ 0.01
CLSTN3-211ENST00000541667 FOXO4P98177 505 aa15.1■□□□□ 0.01
CLSTN3-211ENST00000541667 CAPNS2Q96L46 248 aa15.1■□□□□ 0.01
CLSTN3-211ENST00000541667 ASTN2O75129 1339 aaPredicted RBP15.1■□□□□ 0.01
CLSTN3-211ENST00000541667 MYH3P11055 1940 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 ZNF609O15014 1411 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 ITGA6P23229 1130 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 CCT4P50991 539 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 RSBN1LQ6PCB5 846 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 TNS4Q8IZW8 715 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 AGBL3Q8NEM8 1001 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
CLSTN3-211ENST00000541667 FAM161AQ3B820 660 aa15.08■□□□□ 0
CLSTN3-211ENST00000541667 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0
CLSTN3-211ENST00000541667 HHIPL1Q96JK4 782 aa15.08■□□□□ 0
CLSTN3-211ENST00000541667 AOC2O75106 756 aa15.07■□□□□ 0
CLSTN3-211ENST00000541667 HSPA8P11142 646 aaKnown RBP15.07■□□□□ 0
CLSTN3-211ENST00000541667 KLRK1P26718 216 aa15.07■□□□□ 0
CLSTN3-211ENST00000541667 CTCFP49711 727 aaPredicted RBP15.07■□□□□ 0
CLSTN3-211ENST00000541667 MYH16Q9H6N6 1097 aa15.07■□□□□ 0
CLSTN3-211ENST00000541667 LEMD3Q9Y2U8 911 aa15.07■□□□□ 0
CLSTN3-211ENST00000541667 IRS2Q9Y4H2 1338 aa15.07■□□□□ 0
CLSTN3-211ENST00000541667 MED23Q9ULK4 1368 aa15.07■□□□□ 0
CLSTN3-211ENST00000541667 PSME4Q14997 1843 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 USP17L3A6NCW0 530 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 USP17L4A6NCW7 530 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 ADM5C9JUS6 153 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 MAP2K2P36507 400 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 ECE1P42892 770 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 LBX1P52954 281 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
CLSTN3-211ENST00000541667 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 DACT2Q5SW24 774 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
CLSTN3-211ENST00000541667 KRT26Q7Z3Y9 468 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms