RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 VEGFBP49765 207 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 FLIIQ13045 1269 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 GRM1Q13255 1194 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 DLK2Q6UY11 383 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 USP50Q70EL3 339 aaPredicted RBP17.99■□□□□ 0.47
SUDS3-203ENST00000541591 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
SUDS3-203ENST00000541591 VPS33BQ9H267 617 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 ANKIB1Q9P2G1 1089 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
SUDS3-203ENST00000541591 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
SUDS3-203ENST00000541591 THSD7BQ9C0I4 1608 aa17.98■□□□□ 0.47
SUDS3-203ENST00000541591 HIRAP54198 1017 aaPredicted RBP17.98■□□□□ 0.47
SUDS3-203ENST00000541591 CTSWP56202 376 aa17.98■□□□□ 0.47
SUDS3-203ENST00000541591 NEXNQ0ZGT2 675 aa17.98■□□□□ 0.47
SUDS3-203ENST00000541591 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
SUDS3-203ENST00000541591 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
SUDS3-203ENST00000541591 GREM2Q9H772 168 aa17.98■□□□□ 0.47
SUDS3-203ENST00000541591 F6X3S4 739 aa17.97■□□□□ 0.47
SUDS3-203ENST00000541591 VAMP4O75379 141 aa17.97■□□□□ 0.47
SUDS3-203ENST00000541591 EGFRP00533 1210 aa17.97■□□□□ 0.47
SUDS3-203ENST00000541591 TNIP1Q15025 636 aa17.97■□□□□ 0.47
SUDS3-203ENST00000541591 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
SUDS3-203ENST00000541591 SAMD7Q7Z3H4 446 aa17.97■□□□□ 0.47
SUDS3-203ENST00000541591 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
SUDS3-203ENST00000541591 TBC1D10BQ4KMP7 808 aaPredicted RBP17.96■□□□□ 0.47
SUDS3-203ENST00000541591 RBM26Q5T8P6 1007 aaKnown RBP17.96■□□□□ 0.47
SUDS3-203ENST00000541591 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
SUDS3-203ENST00000541591 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
SUDS3-203ENST00000541591 CAPN15O75808 1086 aa17.95■□□□□ 0.46
SUDS3-203ENST00000541591 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
SUDS3-203ENST00000541591 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
SUDS3-203ENST00000541591 EYA3Q99504 573 aa17.95■□□□□ 0.46
SUDS3-203ENST00000541591 GGA1Q9UJY5 639 aa17.95■□□□□ 0.46
SUDS3-203ENST00000541591 G3V3G9 751 aa17.94■□□□□ 0.46
SUDS3-203ENST00000541591 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
SUDS3-203ENST00000541591 DCAF8Q5TAQ9 597 aa17.94■□□□□ 0.46
SUDS3-203ENST00000541591 CST9Q5W186 159 aa17.94■□□□□ 0.46
SUDS3-203ENST00000541591 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
SUDS3-203ENST00000541591 ECM29Q5VYK3 1845 aa17.93■□□□□ 0.46
SUDS3-203ENST00000541591 FOXN1O15353 648 aa17.93■□□□□ 0.46
SUDS3-203ENST00000541591 GCKRQ14397 625 aa17.93■□□□□ 0.46
SUDS3-203ENST00000541591 DEFB115Q30KQ5 88 aa17.93■□□□□ 0.46
SUDS3-203ENST00000541591 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
SUDS3-203ENST00000541591 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
SUDS3-203ENST00000541591 CASP8AP2Q9UKL3 1982 aa17.92■□□□□ 0.46
SUDS3-203ENST00000541591 H7C1D1 291 aa17.92■□□□□ 0.46
SUDS3-203ENST00000541591 H7C1W4 665 aa17.92■□□□□ 0.46
SUDS3-203ENST00000541591 CELF2O95319 508 aaKnown RBP17.92■□□□□ 0.46
SUDS3-203ENST00000541591 HSP90B1P14625 803 aaKnown RBP17.92■□□□□ 0.46
SUDS3-203ENST00000541591 CYP4F22Q6NT55 531 aa17.92■□□□□ 0.46
SUDS3-203ENST00000541591 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
SUDS3-203ENST00000541591 ASTN2O75129 1339 aaPredicted RBP17.92■□□□□ 0.46
SUDS3-203ENST00000541591 XDHP47989 1333 aa17.92■□□□□ 0.46
SUDS3-203ENST00000541591 RASSF10A6NK89 507 aa17.91■□□□□ 0.46
SUDS3-203ENST00000541591 CASP7P55210 303 aa17.91■□□□□ 0.46
SUDS3-203ENST00000541591 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
SUDS3-203ENST00000541591 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
SUDS3-203ENST00000541591 CDC5LQ99459 802 aaKnown RBP17.91■□□□□ 0.46
SUDS3-203ENST00000541591 MXD3Q9BW11 206 aa17.91■□□□□ 0.46
SUDS3-203ENST00000541591 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
SUDS3-203ENST00000541591 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
SUDS3-203ENST00000541591 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
SUDS3-203ENST00000541591 ADM5C9JUS6 153 aa17.9■□□□□ 0.46
SUDS3-203ENST00000541591 KLRK1P26718 216 aa17.9■□□□□ 0.46
SUDS3-203ENST00000541591 MINPP1Q9UNW1 487 aa17.9■□□□□ 0.46
SUDS3-203ENST00000541591 CHMP3Q9Y3E7 222 aa17.9■□□□□ 0.46
SUDS3-203ENST00000541591 AOC2O75106 756 aa17.89■□□□□ 0.45
SUDS3-203ENST00000541591 ITGA6P23229 1130 aa17.89■□□□□ 0.45
SUDS3-203ENST00000541591 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
SUDS3-203ENST00000541591 TNS4Q8IZW8 715 aa17.89■□□□□ 0.45
SUDS3-203ENST00000541591 SCAF8Q9UPN6 1271 aaKnown RBP17.89■□□□□ 0.45
SUDS3-203ENST00000541591 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
SUDS3-203ENST00000541591 TXNRD3Q86VQ6 643 aa17.88■□□□□ 0.45
SUDS3-203ENST00000541591 LINS1Q8NG48 757 aa17.88■□□□□ 0.45
SUDS3-203ENST00000541591 CAPNS2Q96L46 248 aa17.88■□□□□ 0.45
SUDS3-203ENST00000541591 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
SUDS3-203ENST00000541591 SNAP23O00161 211 aa17.87■□□□□ 0.45
SUDS3-203ENST00000541591 IGHMBP2P38935 993 aaKnown RBP17.87■□□□□ 0.45
SUDS3-203ENST00000541591 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
SUDS3-203ENST00000541591 KIF4BQ2VIQ3 1234 aa17.87■□□□□ 0.45
SUDS3-203ENST00000541591 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
SUDS3-203ENST00000541591 TLL2Q9Y6L7 1015 aa17.87■□□□□ 0.45
SUDS3-203ENST00000541591 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
SUDS3-203ENST00000541591 EPHA10Q5JZY3 1008 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 BEND3Q5T5X7 828 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 HELBQ8NG08 1087 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-203ENST00000541591 DPF2Q92785 391 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 BSDC1Q9NW68 430 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-203ENST00000541591 PGAP2Q9UHJ9 254 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 TSKSQ9UJT2 592 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 MED23Q9ULK4 1368 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 ARAP2Q8WZ64 1704 aa17.86■□□□□ 0.45
SUDS3-203ENST00000541591 RSBN1LQ6PCB5 846 aaPredicted RBP17.85■□□□□ 0.45
SUDS3-203ENST00000541591 ZNF594Q96JF6 807 aaPredicted RBP17.85■□□□□ 0.45
SUDS3-203ENST00000541591 ZNF521Q96K83 1311 aa17.85■□□□□ 0.45
SUDS3-203ENST00000541591 PLA2G12BQ9BX93 195 aa17.85■□□□□ 0.45
SUDS3-203ENST00000541591 GGA3Q9NZ52 723 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms