RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 KLF16Q9BXK1 252 aaPredicted RBP7.49□□□□□ -1.21
CDKN3-206ENST00000541304 STRN4Q9NRL3 753 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 USP21Q9UK80 565 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 AFF2P51816 1311 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 IL16Q14005 1332 aa7.49□□□□□ -1.21
CDKN3-206ENST00000541304 RGPD5Q99666 1765 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 MAP3K5Q99683 1374 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 MEGF6O75095 1541 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 CTDSPL2Q05D32 466 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 AKAP4Q5JQC9 854 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 C1orf141Q5JVX7 400 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
CDKN3-206ENST00000541304 WDR63Q8IWG1 891 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 SLC16A10Q8TF71 515 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 RTF1Q92541 710 aaKnown RBP7.48□□□□□ -1.21
CDKN3-206ENST00000541304 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDKN3-206ENST00000541304 FAM117AQ9C073 453 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 BABAM1Q9NWV8 329 aa7.48□□□□□ -1.21
CDKN3-206ENST00000541304 NXF1Q9UBU9 619 aaKnown RBP7.48□□□□□ -1.21
CDKN3-206ENST00000541304 GNAT3A8MTJ3 354 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 APAF1O14727 1248 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 TMPOP42166 694 aaKnown RBP7.47□□□□□ -1.21
CDKN3-206ENST00000541304 VASH1Q7L8A9 365 aaPredicted RBP7.47□□□□□ -1.21
CDKN3-206ENST00000541304 AEBP1Q8IUX7 1158 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 IFNL2Q8IZJ0 200 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 ITPKCQ96DU7 683 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 PURBQ96QR8 312 aaKnown RBP7.47□□□□□ -1.21
CDKN3-206ENST00000541304 CHMP4AQ9BY43 222 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
CDKN3-206ENST00000541304 ZC3H4Q9UPT8 1303 aaKnown RBP7.47□□□□□ -1.21
CDKN3-206ENST00000541304 BCL9O00512 1426 aa7.46□□□□□ -1.21
CDKN3-206ENST00000541304 LRRC37A3O60309 1634 aa7.46□□□□□ -1.21
CDKN3-206ENST00000541304 CENPBP07199 599 aaPredicted RBP7.46□□□□□ -1.22
CDKN3-206ENST00000541304 GRM5P41594 1212 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 RIPK4P57078 832 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 PPP2R2DQ66LE6 453 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 ZNF530Q6P9A1 599 aaPredicted RBP7.46□□□□□ -1.22
CDKN3-206ENST00000541304 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 ZCRB1Q8TBF4 217 aaKnown RBP7.46□□□□□ -1.22
CDKN3-206ENST00000541304 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 DCAF5Q96JK2 942 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
CDKN3-206ENST00000541304 FKBPLQ9UIM3 349 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
CDKN3-206ENST00000541304 MRC1P22897 1456 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 ADAMTS7Q9UKP4 1686 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 SOS1Q07889 1333 aaPredicted RBP7.46□□□□□ -1.22
CDKN3-206ENST00000541304 ZNF521Q96K83 1311 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 CEMIPQ8WUJ3 1361 aa7.46□□□□□ -1.22
CDKN3-206ENST00000541304 E9PSI1 815 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 EXOC5O00471 708 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 HMGB2P26583 209 aaKnown RBP7.45□□□□□ -1.22
CDKN3-206ENST00000541304 INSM1Q01101 510 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-206ENST00000541304 DDB1Q16531 1140 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 MTHFSDQ2M296 383 aaKnown RBP7.45□□□□□ -1.22
CDKN3-206ENST00000541304 ERFEQ4G0M1 354 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 WWC1Q8IX03 1113 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 MEIOBQ8N635 442 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 USHBP1Q8N6Y0 703 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 MYH16Q9H6N6 1097 aa7.45□□□□□ -1.22
CDKN3-206ENST00000541304 RGPD2P0DJD1 1756 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 UPP2O95045 317 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 CT47B1P0C2W7 299 aaPredicted RBP7.44□□□□□ -1.22
CDKN3-206ENST00000541304 PHKG2P15735 406 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 GNAI1P63096 354 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 RBM6P78332 1123 aaKnown RBP7.44□□□□□ -1.22
CDKN3-206ENST00000541304 PDXDC2PQ6P474 469 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 CCDC116Q8IYX3 515 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 PROCA1Q8NCQ7 364 aaPredicted RBP7.44□□□□□ -1.22
CDKN3-206ENST00000541304 PHACTR3Q96KR7 559 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 ARHGAP9Q9BRR9 750 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 IFT57Q9NWB7 429 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 GLI3P10071 1580 aa7.44□□□□□ -1.22
CDKN3-206ENST00000541304 ERVV-2B6SEH9 535 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 TEFQ10587 303 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 NR6A1Q15406 480 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 IRF7Q92985 503 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 ZNF428Q96B54 188 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 QTRT2Q9H974 415 aaKnown RBP7.43□□□□□ -1.22
CDKN3-206ENST00000541304 USP35Q9P2H5 1018 aa7.43□□□□□ -1.22
CDKN3-206ENST00000541304 CDV3Q9UKY7 258 aaKnown RBP7.43□□□□□ -1.22
CDKN3-206ENST00000541304 H3BM21 787 aa7.42□□□□□ -1.22
CDKN3-206ENST00000541304 AP1G2O75843 785 aa7.42□□□□□ -1.22
CDKN3-206ENST00000541304 C6orf118Q5T5N4 469 aa7.42□□□□□ -1.22
CDKN3-206ENST00000541304 PNMA1Q8ND90 353 aa7.42□□□□□ -1.22
CDKN3-206ENST00000541304 SHANK3Q9BYB0 1731 aa7.41□□□□□ -1.22
CDKN3-206ENST00000541304 CYP27B1O15528 508 aa7.41□□□□□ -1.22
CDKN3-206ENST00000541304 RNMTO43148 476 aaKnown RBP7.41□□□□□ -1.22
CDKN3-206ENST00000541304 HOXB7P09629 217 aa7.41□□□□□ -1.22
CDKN3-206ENST00000541304 USP17L8P0C7I0 530 aa7.41□□□□□ -1.22
CDKN3-206ENST00000541304 RXRBP28702 533 aa7.41□□□□□ -1.22
CDKN3-206ENST00000541304 NEUROD2Q15784 382 aa7.41□□□□□ -1.22
CDKN3-206ENST00000541304 YTHDC1Q96MU7 727 aaKnown RBP7.41□□□□□ -1.22
CDKN3-206ENST00000541304 KDM6AO15550 1401 aaPredicted RBP7.41□□□□□ -1.22
CDKN3-206ENST00000541304 MAN1A2O60476 641 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms