RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PGBD1Q96JS3 809 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 DDX58O95786 925 aaKnown RBP11.36□□□□□ -0.59
CNOT4-212ENST00000541284 GTF2F1P35269 517 aaKnown RBP eCLIP11.36□□□□□ -0.59
CNOT4-212ENST00000541284 NOLC1Q14978 699 aaKnown RBP eCLIP11.36□□□□□ -0.59
CNOT4-212ENST00000541284 TNNI3KQ59H18 835 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
CNOT4-212ENST00000541284 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 MYD88Q99836 296 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 FSD1Q9BTV5 496 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 PYCARDQ9ULZ3 195 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 FPGT-TNNI3KV9GXZ4 949 aa11.36□□□□□ -0.59
CNOT4-212ENST00000541284 JAK2O60674 1132 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 RESTQ13127 1097 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 BLOC1S2Q6QNY1 142 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 ZNF710Q8N1W2 664 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 MYL6BP14649 208 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 ATF3P18847 181 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
CNOT4-212ENST00000541284 TFCP2Q12800 502 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 KIAA1524Q8TCG1 905 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 GTF3C6Q969F1 213 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 SEC62Q99442 399 aaKnown RBP11.35□□□□□ -0.59
CNOT4-212ENST00000541284 LTBP1Q14766 1721 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
CNOT4-212ENST00000541284 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
CNOT4-212ENST00000541284 PSMA5P28066 241 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 HMG20BQ9P0W2 317 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
CNOT4-212ENST00000541284 CCDC129Q6ZRS4 1044 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
CNOT4-212ENST00000541284 CYP21A2P08686 494 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 CHD4Q14839 1912 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 BCL9LQ86UU0 1499 aa11.34□□□□□ -0.59
CNOT4-212ENST00000541284 PTMAP06454 111 aaKnown RBP11.33□□□□□ -0.6
CNOT4-212ENST00000541284 KRT85P78386 507 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 SMARCC2Q8TAQ2 1214 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 HAUS7Q99871 368 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 FOXO4P98177 505 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 TYRO3Q06418 890 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 ANKRD1Q15327 319 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 DBNDD2Q9BQY9 259 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 TIAM2Q8IVF5 1701 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 SLFNL1Q499Z3 407 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 UBR3Q6ZT12 1888 aa11.33□□□□□ -0.6
CNOT4-212ENST00000541284 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 ATG9AQ7Z3C6 839 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
CNOT4-212ENST00000541284 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 TSC1Q92574 1164 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 AGXT2Q9BYV1 514 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 CLSTN2Q9H4D0 955 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 FAM13BQ9NYF5 915 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
CNOT4-212ENST00000541284 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
CNOT4-212ENST00000541284 SCRN1Q12765 414 aa11.32□□□□□ -0.6
CNOT4-212ENST00000541284 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NR1I2O75469 434 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 HMGN5P82970 282 aaKnown RBP11.31□□□□□ -0.6
CNOT4-212ENST00000541284 STK3Q13188 491 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 CAMK4Q16566 473 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 LUZP1Q86V48 1076 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NUP62CLQ9H1M0 184 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 CBX8Q9HC52 389 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 CCDC192P0DO97 292 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 PDCP20941 246 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 KCNJ4P48050 445 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 MAP3K11Q16584 847 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NBPF10Q6P3W6 841 aaKnown RBP11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NBPF15Q8N660 670 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 BRWD3Q6RI45 1802 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 PRIMPOLQ96LW4 560 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
CNOT4-212ENST00000541284 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
CNOT4-212ENST00000541284 Q6ZUG5 572 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms