RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 COL4A1P02462 1669 aa23.43■■□□□ 1.34
RAD9A-206ENST00000541132 RTL9Q8NET4 1388 aa23.42■■□□□ 1.34
RAD9A-206ENST00000541132 AKAP11Q9UKA4 1901 aa23.42■■□□□ 1.34
RAD9A-206ENST00000541132 IRS4O14654 1257 aaPredicted RBP23.42■■□□□ 1.34
RAD9A-206ENST00000541132 ZNF157P51786 506 aaPredicted RBP23.42■■□□□ 1.34
RAD9A-206ENST00000541132 KIF23Q02241 960 aaPredicted RBP23.42■■□□□ 1.34
RAD9A-206ENST00000541132 TBC1D16Q8TBP0 767 aa23.42■■□□□ 1.34
RAD9A-206ENST00000541132 ZC3H12CQ9C0D7 883 aaKnown RBP23.42■■□□□ 1.34
RAD9A-206ENST00000541132 G3V3G9 751 aa23.41■■□□□ 1.34
RAD9A-206ENST00000541132 HOXB7P09629 217 aa23.41■■□□□ 1.34
RAD9A-206ENST00000541132 RPS8P62241 208 aaKnown RBP23.41■■□□□ 1.34
RAD9A-206ENST00000541132 KIF4BQ2VIQ3 1234 aa23.41■■□□□ 1.34
RAD9A-206ENST00000541132 DCAF8Q5TAQ9 597 aa23.41■■□□□ 1.34
RAD9A-206ENST00000541132 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
RAD9A-206ENST00000541132 SULF1Q8IWU6 871 aa23.4■■□□□ 1.34
RAD9A-206ENST00000541132 HYPKQ9NX55 129 aa23.4■■□□□ 1.34
RAD9A-206ENST00000541132 SAGE1Q9NXZ1 904 aa23.4■■□□□ 1.34
RAD9A-206ENST00000541132 SCN9AQ15858 1988 aa23.4■■□□□ 1.34
RAD9A-206ENST00000541132 TRPA1O75762 1119 aa23.38■■□□□ 1.33
RAD9A-206ENST00000541132 VIL1P09327 827 aaKnown RBP23.38■■□□□ 1.33
RAD9A-206ENST00000541132 TRIM28Q13263 835 aaKnown RBP23.38■■□□□ 1.33
RAD9A-206ENST00000541132 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
RAD9A-206ENST00000541132 GGA3Q9NZ52 723 aa23.38■■□□□ 1.33
RAD9A-206ENST00000541132 RNF186Q9NXI6 227 aa23.37■■□□□ 1.33
RAD9A-206ENST00000541132 PODXL2Q9NZ53 605 aa23.37■■□□□ 1.33
RAD9A-206ENST00000541132 ANKIB1Q9P2G1 1089 aa23.37■■□□□ 1.33
RAD9A-206ENST00000541132 ASTN2O75129 1339 aaPredicted RBP23.36■■□□□ 1.33
RAD9A-206ENST00000541132 UFL1O94874 794 aa23.36■■□□□ 1.33
RAD9A-206ENST00000541132 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
RAD9A-206ENST00000541132 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
RAD9A-206ENST00000541132 SEC31BQ9NQW1 1179 aa23.36■■□□□ 1.33
RAD9A-206ENST00000541132 SLC10A3P09131 477 aa23.35■■□□□ 1.33
RAD9A-206ENST00000541132 HSP90B1P14625 803 aaKnown RBP23.35■■□□□ 1.33
RAD9A-206ENST00000541132 ZBTB38Q8NAP3 1195 aaPredicted RBP23.35■■□□□ 1.33
RAD9A-206ENST00000541132 CDCA5Q96FF9 252 aa23.35■■□□□ 1.33
RAD9A-206ENST00000541132 CSRNP1Q96S65 589 aa23.35■■□□□ 1.33
RAD9A-206ENST00000541132 GGA1Q9UJY5 639 aa23.35■■□□□ 1.33
RAD9A-206ENST00000541132 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.33
RAD9A-206ENST00000541132 GOLGA2Q08379 1002 aa23.33■■□□□ 1.33
RAD9A-206ENST00000541132 SCARF1Q14162 830 aa23.33■■□□□ 1.33
RAD9A-206ENST00000541132 ANGEL2Q5VTE6 544 aaKnown RBP23.33■■□□□ 1.33
RAD9A-206ENST00000541132 AGBL3Q8NEM8 1001 aa23.33■■□□□ 1.33
RAD9A-206ENST00000541132 PSME4Q14997 1843 aa23.33■■□□□ 1.32
RAD9A-206ENST00000541132 MYBBP1AQ9BQG0 1328 aaKnown RBP23.33■■□□□ 1.32
RAD9A-206ENST00000541132 RSBN1LQ6PCB5 846 aaPredicted RBP23.32■■□□□ 1.32
RAD9A-206ENST00000541132 SOX10P56693 466 aa23.31■■□□□ 1.32
RAD9A-206ENST00000541132 ZNF280AP59817 542 aaPredicted RBP23.31■■□□□ 1.32
RAD9A-206ENST00000541132 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
RAD9A-206ENST00000541132 MYD88Q99836 296 aa23.31■■□□□ 1.32
RAD9A-206ENST00000541132 PHAXQ9H814 394 aaKnown RBP23.31■■□□□ 1.32
RAD9A-206ENST00000541132 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
RAD9A-206ENST00000541132 REM2Q8IYK8 340 aaPredicted RBP23.3■■□□□ 1.32
RAD9A-206ENST00000541132 CCDC85AQ96PX6 553 aaPredicted RBP23.3■■□□□ 1.32
RAD9A-206ENST00000541132 TNRC18O15417 2968 aaPredicted RBP23.29■■□□□ 1.32
RAD9A-206ENST00000541132 PDE8AO60658 829 aa23.29■■□□□ 1.32
RAD9A-206ENST00000541132 RASAL3Q86YV0 1011 aa23.29■■□□□ 1.32
RAD9A-206ENST00000541132 JARID2Q92833 1246 aaPredicted RBP23.29■■□□□ 1.32
RAD9A-206ENST00000541132 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
RAD9A-206ENST00000541132 ZNF609O15014 1411 aa23.28■■□□□ 1.32
RAD9A-206ENST00000541132 PCCAP05165 728 aaPredicted RBP23.28■■□□□ 1.32
RAD9A-206ENST00000541132 USP17L8P0C7I0 530 aa23.28■■□□□ 1.32
RAD9A-206ENST00000541132 CCDC191Q8NCU4 936 aa23.28■■□□□ 1.32
RAD9A-206ENST00000541132 MYOZ2Q9NPC6 264 aa23.28■■□□□ 1.32
RAD9A-206ENST00000541132 XDHP47989 1333 aa23.28■■□□□ 1.32
RAD9A-206ENST00000541132 PAPPA2Q9BXP8 1791 aa23.27■■□□□ 1.32
RAD9A-206ENST00000541132 ELL2O00472 640 aaPredicted RBP23.27■■□□□ 1.32
RAD9A-206ENST00000541132 FKBP1BP68106 108 aa23.27■■□□□ 1.32
RAD9A-206ENST00000541132 CTU1Q7Z7A3 348 aaKnown RBP23.27■■□□□ 1.32
RAD9A-206ENST00000541132 ANKRD18AQ8IVF6 992 aa23.27■■□□□ 1.32
RAD9A-206ENST00000541132 USP17L3A6NCW0 530 aa23.26■■□□□ 1.31
RAD9A-206ENST00000541132 USP17L4A6NCW7 530 aa23.26■■□□□ 1.31
RAD9A-206ENST00000541132 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
RAD9A-206ENST00000541132 USP17L1Q7RTZ2 530 aa23.26■■□□□ 1.31
RAD9A-206ENST00000541132 GMLQ99445 158 aa23.26■■□□□ 1.31
RAD9A-206ENST00000541132 CWC25Q9NXE8 425 aaPredicted RBP23.26■■□□□ 1.31
RAD9A-206ENST00000541132 PITPNM2Q9BZ72 1349 aa23.26■■□□□ 1.31
RAD9A-206ENST00000541132 PODNQ7Z5L7 613 aa23.25■■□□□ 1.31
RAD9A-206ENST00000541132 SCAF8Q9UPN6 1271 aaKnown RBP23.25■■□□□ 1.31
RAD9A-206ENST00000541132 ZNF853P0CG23 659 aa23.24■■□□□ 1.31
RAD9A-206ENST00000541132 UBE2Q2LH0YL09 131 aa23.23■■□□□ 1.31
RAD9A-206ENST00000541132 DDX10Q13206 875 aaKnown RBP23.23■■□□□ 1.31
RAD9A-206ENST00000541132 MOB2Q70IA6 237 aa23.23■■□□□ 1.31
RAD9A-206ENST00000541132 METTL22Q9BUU2 404 aaPredicted RBP23.23■■□□□ 1.31
RAD9A-206ENST00000541132 PCDH10Q9P2E7 1040 aa23.23■■□□□ 1.31
RAD9A-206ENST00000541132 SPEF2Q9C093 1822 aa23.22■■□□□ 1.31
RAD9A-206ENST00000541132 DDX58O95786 925 aaKnown RBP23.22■■□□□ 1.31
RAD9A-206ENST00000541132 GNAI1P63096 354 aa23.22■■□□□ 1.31
RAD9A-206ENST00000541132 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
RAD9A-206ENST00000541132 TTLL12Q14166 644 aaPredicted RBP23.21■■□□□ 1.31
RAD9A-206ENST00000541132 NBPF9Q3BBW0 867 aa23.21■■□□□ 1.31
RAD9A-206ENST00000541132 PRAMEF18Q5VWM3 479 aa23.21■■□□□ 1.31
RAD9A-206ENST00000541132 CDC5LQ99459 802 aaKnown RBP23.21■■□□□ 1.31
RAD9A-206ENST00000541132 HDAC9Q9UKV0 1011 aa23.21■■□□□ 1.31
RAD9A-206ENST00000541132 PDE4DIPQ5VU43 2346 aa23.2■■□□□ 1.3
RAD9A-206ENST00000541132 MYH3P11055 1940 aa23.2■■□□□ 1.3
RAD9A-206ENST00000541132 FBXW7Q969H0 707 aa23.2■■□□□ 1.3
RAD9A-206ENST00000541132 WTIPA6NIX2 430 aaPredicted RBP23.19■■□□□ 1.3
RAD9A-206ENST00000541132 TBC1D8O95759 1140 aa23.19■■□□□ 1.3
RAD9A-206ENST00000541132 CTSWP56202 376 aa23.19■■□□□ 1.3
RAD9A-206ENST00000541132 CALD1Q05682 793 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms